RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 KCNJ12Q14500 433 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 DHX8Q14562 1220 aaKnown RBP2.21□□□□□ -2.06
NEDD1-204ENST00000457368 POSTNQ15063 836 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 SKIDA1Q1XH10 827 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 SEZ6Q53EL9 994 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 FHL5Q5TD97 284 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 C1QL3Q5VWW1 255 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 BORAQ6PGQ7 559 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 RBM44Q6ZP01 1051 aaKnown RBP2.21□□□□□ -2.06
NEDD1-204ENST00000457368 MAMDC2Q7Z304 686 aaPredicted RBP2.21□□□□□ -2.06
NEDD1-204ENST00000457368 TMEM145Q8NBT3 493 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 CACTINQ8WUQ7 758 aaKnown RBP2.21□□□□□ -2.06
NEDD1-204ENST00000457368 HTR3CQ8WXA8 447 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 PCED1BQ96HM7 432 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 HEXIM2Q96MH2 286 aaKnown RBP2.21□□□□□ -2.06
NEDD1-204ENST00000457368 FIZ1Q96SL8 496 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 DPH2Q9BQC3 489 aaPredicted RBP2.21□□□□□ -2.06
NEDD1-204ENST00000457368 STRA6Q9BX79 667 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 NIF3L1Q9GZT8 377 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 LIN7BQ9HAP6 207 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 NCOA5Q9HCD5 579 aaKnown RBP2.21□□□□□ -2.06
NEDD1-204ENST00000457368 CSNK1G1Q9HCP0 422 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 GJB4Q9NTQ9 266 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 LARSQ9P2J5 1176 aaKnown RBP2.21□□□□□ -2.06
NEDD1-204ENST00000457368 SIX4Q9UIU6 781 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 NCKAP1Q9Y2A7 1128 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.21□□□□□ -2.06
NEDD1-204ENST00000457368 PTPRJQ12913 1337 aa2.21□□□□□ -2.06
NEDD1-204ENST00000457368 MYLKQ15746 1914 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 F8VP50 259 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CPLX1O14810 134 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 KIAA0391O15091 583 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SCAMP1O15126 338 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PIAS2O75928 621 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 DNTTP04053 509 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ASLP04424 464 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 EPHX1P07099 455 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 THEGLP0DJG4 465 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 HARSP12081 509 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 GOT1P17174 413 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 BDNFP23560 247 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CCT6AP40227 531 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PRPHP41219 470 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PDX1P52945 283 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SLC12A3P55017 1021 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 IKZF1Q13422 519 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 IGFBP7Q16270 282 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CLPPQ16740 277 aaPredicted RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 EXOSC6Q5RKV6 272 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 MPP7Q5T2T1 576 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TMEM215Q68D42 235 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ZCCHC8Q6NZY4 707 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 NEK5Q6P3R8 708 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 LAYNQ6UX15 382 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SERPINA13PQ6UXR4 307 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TADA2BQ86TJ2 420 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ZSCAN30Q86W11 494 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 DCP2Q8IU60 420 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SMYD4Q8IYR2 804 aaPredicted RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 GPATCH11Q8N954 259 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 GPBAR1Q8TDU6 330 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SNX19Q92543 992 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 NAT6Q93015 286 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 FBXO32Q969P5 355 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TTC17Q96AE7 1141 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 MOCOSQ96EN8 888 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 LMLNQ96KR4 655 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 APOLD1Q96LR9 279 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CDK5RAP1Q96SZ6 601 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 MSTO1Q9BUK6 570 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 FBXO44Q9H4M3 255 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PNPLA8Q9NP80 782 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TMEM30AQ9NV96 361 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CLIC5Q9NZA1 410 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SEPT10Q9P0V9 454 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ARHGAP20Q9P2F6 1191 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SCML2Q9UQR0 700 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ATP8B3O60423 1300 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ZNF638Q14966 1978 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 A0A087X0B3 334 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 VPS37CA5D8V6 355 aaPredicted RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 NEMP2A6NFY4 417 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PRAMEF26H0Y7S4 382 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 WNT9AO14904 365 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PLD2O14939 933 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 HNRNPDLO14979 420 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TLR5O60602 858 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PFKFB2O60825 505 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 STC2O76061 302 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TNFSF15O95150 251 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 DLDP09622 509 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 C5AR1P21730 350 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ACAT1P24752 427 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 POLR2BP30876 1174 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SLC5A2P31639 672 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ATP5C1P36542 298 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CCT2P78371 535 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TAGLNQ01995 201 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 KLRB1Q12918 225 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 MAP7Q14244 749 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms