RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 IDH3BO43837 385 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 EXOC3O60645 756 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 GUCY1B2O75343 617 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 TSPAN9O75954 239 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 ALOX5P09917 674 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 TPBGLP0DKB5 382 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 NR2F1P10589 423 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 GNAT1P11488 350 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 AKAP5P24588 427 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 ALDH4A1P30038 563 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 THPOP40225 353 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 IL15P40933 162 aaPredicted RBP5.58□□□□□ -1.52
VPS41-209ENST00000457055 HTR2BP41595 481 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 DHPSP49366 369 aaPredicted RBP5.58□□□□□ -1.52
VPS41-209ENST00000457055 NT5C2P49902 561 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 SCNN1BP51168 640 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 ABATP80404 500 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 TLE2Q04725 743 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 SPIRE1Q08AE8 756 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 ACVR2BQ13705 512 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 CNGA2Q16280 664 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 TSTQ16762 297 aaKnown RBP5.58□□□□□ -1.52
VPS41-209ENST00000457055 FAM110CQ1W6H9 321 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 KIZQ2M2Z5 673 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 FSCBQ5H9T9 825 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 FAM209AQ5JX71 171 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 FBXO47Q5MNV8 452 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 ATPAF1Q5TC12 328 aaPredicted RBP5.58□□□□□ -1.52
VPS41-209ENST00000457055 TBC1D9BQ66K14 1250 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 TAF2Q6P1X5 1199 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 CEP85Q6P2H3 762 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 KLHL24Q6TFL4 600 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 UNC13DQ70J99 1090 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 PTF1AQ7RTS3 328 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 GPR142Q7Z601 462 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 PHC2Q8IXK0 858 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 CCDC105Q8IYK2 499 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 KRT78Q8N1N4 520 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 TCAIMQ8N3R3 496 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 GALNT15Q8N3T1 639 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 STPG3Q8N7X2 389 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 KIF18AQ8NI77 898 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 MYCBPAPQ8TBZ2 947 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 ENKURQ8TC29 256 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 SCFD2Q8WU76 684 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 DEPDC1BQ8WUY9 529 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 METTL21AQ8WXB1 218 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 SYN2Q92777 582 aaPredicted RBP5.58□□□□□ -1.52
VPS41-209ENST00000457055 INPP5DQ92835 1189 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 CUL5Q93034 780 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 ZUFSPQ96AP4 578 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 CALML4Q96GE6 196 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 AJUBAQ96IF1 538 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 FEM1CQ96JP0 617 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 GNRHR2Q96P88 292 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 GBP5Q96PP8 586 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 LRRC37BQ96QE4 947 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 PRAM1Q96QH2 718 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 LMF1Q96S06 567 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 SECISBP2Q96T21 854 aaKnown RBP5.58□□□□□ -1.52
VPS41-209ENST00000457055 KCNJ15Q99712 375 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 CNPPD1Q9BV87 410 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 SORBS1Q9BX66 1292 aaKnown RBP5.58□□□□□ -1.52
VPS41-209ENST00000457055 FUT8Q9BYC5 575 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 RAD21L1Q9H4I0 556 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 SEC61A2Q9H9S3 476 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 PARVBQ9HBI1 364 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 DMRT3Q9NQL9 472 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 EIF2B3Q9NR50 452 aaKnown RBP5.58□□□□□ -1.52
VPS41-209ENST00000457055 KCND1Q9NSA2 647 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 RRP7BPQ9NSQ0 103 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 SLC35D1Q9NTN3 355 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 NINJ2Q9NZG7 142 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 LRFN1Q9P244 771 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 ARHGAP20Q9P2F6 1191 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 POLKQ9UBT6 870 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 HESX1Q9UBX0 185 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 TSPYL4Q9UJ04 414 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 CLCA2Q9UQC9 943 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 DLGAP4Q9Y2H0 992 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 DERAQ9Y315 318 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 DLC1Q96QB1 1528 aa5.58□□□□□ -1.52
VPS41-209ENST00000457055 WDR90Q96KV7 1748 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 C1orf232A0A0U1RR37 186 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 A0A1B0GWJ7 208 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 HEATR9A2RTY3 570 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 RHPN2P1A8MT19 583 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 TARM1B6A8C7 271 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 E9PBE3 544 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 FAM227AF5H4B4 570 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CLN5O75503 358 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 BEST1O76090 585 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 RETP07949 1114 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 CLUP10909 449 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 KRT5P13647 590 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 GLRA2P23416 452 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 PTBP1P26599 531 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS41-209ENST00000457055 PEX2P28328 305 aa5.57□□□□□ -1.52
VPS41-209ENST00000457055 PDIA3P30101 505 aaKnown RBP5.57□□□□□ -1.52
VPS41-209ENST00000457055 HOXA6P31267 233 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms