RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 DYNLT1P63172 113 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 IL10RBQ08334 325 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 SEL1L2Q5TEA6 688 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 SDE2Q6IQ49 451 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 SERPINA13PQ6UXR4 307 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 BZW1Q7L1Q6 419 aaKnown RBP18.24■□□□□ 0.51
FAM239A-203ENST00000456563 SYT13Q7L8C5 426 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 SH2D3CQ8N5H7 860 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 CCDC33Q8N5R6 958 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 TXNDC5Q8NBS9 432 aaKnown RBP18.24■□□□□ 0.51
FAM239A-203ENST00000456563 PDFQ9HBH1 243 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 IPO11Q9UI26 975 aaKnown RBP18.24■□□□□ 0.51
FAM239A-203ENST00000456563 HEY1Q9Y5J3 304 aa18.24■□□□□ 0.51
FAM239A-203ENST00000456563 TRIOO75962 3097 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 WASH3PC4AMC7 463 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 J3KR12 359 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 APOC4-APOC2K7ER74 178 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 APOC2P02655 101 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 ATP1A1P05023 1023 aaKnown RBP18.23■□□□□ 0.51
FAM239A-203ENST00000456563 AVPR2P30518 371 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 GARSP41250 739 aaKnown RBP18.23■□□□□ 0.51
FAM239A-203ENST00000456563 SERPINH1P50454 418 aaKnown RBP18.23■□□□□ 0.51
FAM239A-203ENST00000456563 MTAPQ13126 283 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 INO80DQ53TQ3 878 aaPredicted RBP18.23■□□□□ 0.51
FAM239A-203ENST00000456563 TMEM31Q5JXX7 168 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 NPNTQ6UXI9 565 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 LINGO4Q6UY18 593 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 ARHGAP36Q6ZRI8 547 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 METTL3Q86U44 580 aaKnown RBP18.23■□□□□ 0.51
FAM239A-203ENST00000456563 ATPAF2Q8N5M1 289 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 ATP11CQ8NB49 1132 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 FRS2Q8WU20 508 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 CASKIN2Q8WXE0 1202 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 HDAC11Q96DB2 347 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 OLFM3Q96PB7 478 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 TSGA13Q96PP4 275 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 WDR24Q96S15 920 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 SP110Q9HB58 689 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 SUN2Q9UH99 717 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 SLC8A2Q9UPR5 921 aa18.23■□□□□ 0.51
FAM239A-203ENST00000456563 MUC22E2RYF6 1773 aaPredicted RBP18.22■□□□□ 0.51
FAM239A-203ENST00000456563 K7ERQ8 282 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 DLL1O00548 723 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 MAP3K6O95382 1288 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 PRKCHP24723 683 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 WASP42768 502 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 KLF1Q13351 362 aaPredicted RBP18.22■□□□□ 0.51
FAM239A-203ENST00000456563 PDK1Q15118 436 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 CRY1Q16526 586 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 HNRNPA1L2Q32P51 320 aaKnown RBP18.22■□□□□ 0.51
FAM239A-203ENST00000456563 P3H4Q92791 437 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 FATE1Q969F0 183 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 PBKQ96KB5 322 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 ZNF599Q96NL3 588 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 CEP44Q9C0F1 390 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 BRD8Q9H0E9 1235 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 UBA2Q9UBT2 640 aaPredicted RBP18.22■□□□□ 0.51
FAM239A-203ENST00000456563 ACTL7AQ9Y615 435 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 NUP205Q92621 2012 aa18.22■□□□□ 0.51
FAM239A-203ENST00000456563 TTC34A8MYJ7 566 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 SMAD6O43541 496 aaKnown RBP18.21■□□□□ 0.51
FAM239A-203ENST00000456563 PAPSS2O95340 614 aaPredicted RBP18.21■□□□□ 0.51
FAM239A-203ENST00000456563 EPHX1P07099 455 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 HLA-EP13747 358 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 HOXB2P14652 356 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 PECAM1P16284 738 aaPredicted RBP18.21■□□□□ 0.51
FAM239A-203ENST00000456563 CCNCP24863 283 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 ZNF33AQ06730 810 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 RFTN1Q14699 578 aaPredicted RBP18.21■□□□□ 0.51
FAM239A-203ENST00000456563 DLG2Q15700 870 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 TIGD7Q6NT04 549 aaPredicted RBP18.21■□□□□ 0.51
FAM239A-203ENST00000456563 LEKR1Q6ZMV7 388 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 SLC13A5Q86YT5 568 aaPredicted RBP18.21■□□□□ 0.51
FAM239A-203ENST00000456563 PTPRN2Q92932 1015 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 ISG20Q96AZ6 181 aaKnown RBP18.21■□□□□ 0.51
FAM239A-203ENST00000456563 CD248Q9HCU0 757 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 C2orf42Q9NWW7 574 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 SAE1Q9UBE0 346 aaPredicted RBP18.21■□□□□ 0.51
FAM239A-203ENST00000456563 SNX12Q9UMY4 172 aa18.21■□□□□ 0.51
FAM239A-203ENST00000456563 EDDM13A0A1B0GTR0 161 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 A0A1W2PQF6 199 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 TARSL2A2RTX5 802 aaKnown RBP18.2■□□□□ 0.5
FAM239A-203ENST00000456563 PPP1R12AO14974 1030 aaPredicted RBP18.2■□□□□ 0.5
FAM239A-203ENST00000456563 PEX11BO96011 259 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 CXCR5P32302 372 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 CXCL12P48061 93 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 CCR3P51677 355 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 DGKEP52429 567 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 ETF1P62495 437 aaKnown RBP18.2■□□□□ 0.5
FAM239A-203ENST00000456563 PPIDQ08752 370 aaKnown RBP18.2■□□□□ 0.5
FAM239A-203ENST00000456563 CAMK2GQ13555 558 aaPredicted RBP18.2■□□□□ 0.5
FAM239A-203ENST00000456563 STARD3Q14849 445 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 NOMO1Q15155 1222 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 ACCSLQ4AC99 568 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 CCDC181Q5TID7 509 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 C22orf39Q6P5X5 142 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 TMEM92Q6UXU6 159 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 PCDH20Q8N6Y1 951 aaKnown RBP18.2■□□□□ 0.5
FAM239A-203ENST00000456563 ZNF366Q8N895 744 aa18.2■□□□□ 0.5
FAM239A-203ENST00000456563 DTWD2Q8NBA8 298 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms