RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 GRIA2P42262 883 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 NUMBP49757 651 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 WASHC5Q12768 1159 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 HNRNPDQ14103 355 aaKnown RBP16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 DHX34Q14147 1143 aaKnown RBP16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 RFTN1Q14699 578 aaPredicted RBP16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 IER5LQ5T953 404 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 TMCO4Q5TGY1 634 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 RETSATQ6NUM9 610 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 TXNDC11Q6PKC3 985 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 TEX26Q8N6G2 289 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 NOA1Q8NC60 698 aaKnown RBP16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 GRK7Q8WTQ7 553 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 CCDC114Q96M63 670 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 IL12RB2Q99665 862 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 P2RY13Q9BPV8 354 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 AMACRQ9UHK6 382 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 NEU2Q9Y3R4 380 aa16.92■□□□□ 0.3
CCDC90B-202ENST00000455220 PRRT4C9JH25 899 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 KCNK1O00180 336 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 ASLP04424 464 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 CCNB1P14635 433 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 POLR2EP19388 210 aaKnown RBP16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 PTPN3P26045 913 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 PTGIRP43119 386 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 VASPP50552 380 aaPredicted RBP16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 GALK1P51570 392 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 GEMIN4P57678 1058 aaKnown RBP16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 SLC20A2Q08357 652 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 ZBTB17Q13105 803 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 INO80DQ53TQ3 878 aaPredicted RBP16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 RNF135Q8IUD6 432 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 FAM71DQ8N9W8 422 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 LRRN4CLQ8ND94 238 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 CASKIN2Q8WXE0 1202 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 ZNF419Q96HQ0 510 aaPredicted RBP16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 VAT1Q99536 393 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 FERMT1Q9BQL6 677 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 FBRSL1Q9HCM7 1045 aaKnown RBP16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 UBA2Q9UBT2 640 aaPredicted RBP16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 HS3ST2Q9Y278 367 aa16.91■□□□□ 0.3
CCDC90B-202ENST00000455220 C5orf60A6NFR6 353 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 SHISA7A6NL88 538 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 SGK1O00141 431 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 RNF103O00237 685 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 TIMM44O43615 452 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 SLU7O95391 586 aaKnown RBP16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 ECEL1O95672 775 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 APODP05090 189 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 CTSOP43234 321 aaPredicted RBP16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 SERPINH1P50454 418 aaKnown RBP16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 RENBPP51606 427 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 ECT2LQ008S8 904 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 LBRQ14739 615 aaKnown RBP16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 SLC44A4Q53GD3 710 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 TEX44Q53QW1 395 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 NSMCE1Q8WV22 266 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 EXOC4Q96A65 974 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 ELOVL2Q9NXB9 296 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 ACTL7AQ9Y615 435 aa16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 MUC22E2RYF6 1773 aaPredicted RBP16.9■□□□□ 0.3
CCDC90B-202ENST00000455220 TBC1D3BA6NDS4 549 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 GCATO75600 419 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 GAS8O95995 478 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 MT-CO1P00395 513 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 ATP5BP06576 529 aaKnown RBP16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 DLDP09622 509 aaKnown RBP16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 NRLP54845 237 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 DR1Q01658 176 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 SLC10A7Q0GE19 358 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 P3H1Q32P28 736 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 TMEM196Q5HYL7 178 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 MARC1Q5VT66 337 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 LINGO4Q6UY18 593 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 LEKR1Q6ZMV7 388 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 SYDE1Q6ZW31 735 aaPredicted RBP16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 GSTA5Q7RTV2 222 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 MAATS1Q7Z4T9 603 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 METTL3Q86U44 580 aaKnown RBP16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 GJD3Q8N144 294 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 GLIS1Q8NBF1 620 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 CCDC26Q8TAB7 109 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 MRGPRX3Q96LB0 322 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 SPATA13Q96N96 652 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 CIPCQ9C0C6 399 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 PCDH9Q9HC56 1237 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 SEPT10Q9P0V9 454 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 SLC25A13Q9UJS0 675 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 ERVW-1Q9UQF0 538 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 STARD13Q9Y3M8 1113 aa16.89■□□□□ 0.3
CCDC90B-202ENST00000455220 VCANP13611 3396 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 RIOK3O14730 519 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 RAD51CO43502 376 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 OPHN1O60890 802 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 STK10O94804 968 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 IFNB1P01574 187 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 JCHAINP01591 159 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 SRPRAP08240 638 aaKnown RBP16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 MLF2Q15773 248 aaPredicted RBP16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 PTPRNQ16849 979 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms