RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 DCP2Q8IU60 420 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 ZNF248Q8NDW4 579 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 OR4C6Q8NH72 309 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 ZNF606Q8WXB4 792 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 KAT5Q92993 513 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 GRAMD1AQ96CP6 724 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 MYEOVQ96EZ4 313 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 PPP1R16AQ96I34 528 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 ZNF578Q96N58 590 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 DEPDC7Q96QD5 511 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 PRMT1Q99873 361 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 FEM1AQ9BSK4 669 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 DUSP23Q9BVJ7 150 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 RRN3Q9NYV6 651 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 NCKIPSDQ9NZQ3 722 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 ARHGAP20Q9P2F6 1191 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 XPO7Q9UIA9 1087 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 VPS28Q9UK41 221 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 HS3ST2Q9Y278 367 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 WNT9AO14904 365 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 SIGLEC6O43699 453 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 TLX3O43711 291 aaPredicted RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 LETM1O95202 739 aaPredicted RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 MT-CO3P00414 261 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 THEGLP0DJG4 465 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 HNRNPA2B1P22626 353 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 ITPKBP27987 946 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 MAT2AP31153 395 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 RECQLP46063 649 aaPredicted RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 CDH4P55283 916 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 MARSP56192 900 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 PCBP4P57723 403 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 INSM1Q01101 510 aaPredicted RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 BNIP3Q12983 259 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 EIF4EBP2Q13542 120 aaPredicted RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 AUHQ13825 339 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 CXorf57Q6NSI4 855 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 TTI2Q6NXR4 508 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 FBXL22Q6P050 247 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 C11orf57Q6ZUT1 292 aaPredicted RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 HORMAD1Q86X24 394 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 ZDHHC17Q8IUH5 632 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 ARHGEF19Q8IW93 802 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 TRIM59Q8IWR1 403 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 SH2D3CQ8N5H7 860 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 TMEM145Q8NBT3 493 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 TMIEQ8NEW7 156 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 NELFBQ8WX92 580 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 WBP1Q96G27 269 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 KREMEN1Q96MU8 473 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 SLC2A13Q96QE2 648 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 LGMNQ99538 433 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 INTS2Q9H0H0 1204 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 MUC3BQ9H195 1237 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 SYNCQ9H7C4 482 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 GDPD2Q9HCC8 539 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 UBE2TQ9NPD8 197 aaPredicted RBP8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 NLGN3Q9NZ94 848 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 TBC1D30Q9Y2I9 924 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 COL6A6A6NMZ7 2263 aa8.23□□□□□ -1.09
NIF3L1-209ENST00000454952 HELZ2Q9BYK8 2649 aaKnown RBP8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 A0A1W2PQU0 124 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 A6NNZ2 444 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 H3BM21 787 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 ERVH48-1M5A8F1 160 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 KPNA3O00505 521 aaPredicted RBP8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 SDC3O75056 442 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 DXOO77932 396 aaKnown RBP8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 F9P00740 461 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 CKMT1AP12532 417 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 VAV1P15498 845 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 DGKAP23743 735 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 CHRNA3P32297 505 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 GCGRP47871 477 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 TMPRSS3P57727 454 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 ERVPABLB-1P60509 514 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 HNRNPKP61978 463 aaKnown RBP eCLIP8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 RHDQ02161 417 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 TLE3Q04726 772 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 PTK2Q05397 1052 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 KCNMA1Q12791 1236 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 C5orf22Q49AR2 442 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 BRMS1LQ5PSV4 323 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 KLHL10Q6JEL2 608 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 LRRC31Q6UY01 552 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 ZNF783Q6ZMS7 281 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 Q6ZVU0 165 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 ZNF605Q86T29 641 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 SETD3Q86TU7 594 aaPredicted RBP8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 DEFB106AQ8N104 65 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 FAM181AQ8N9Y4 354 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 DCAF4L2Q8NA75 395 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 ATP11CQ8NB49 1132 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 C1orf131Q8NDD1 294 aaKnown RBP8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 ALG14Q96F25 216 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 PPP1R13BQ96KQ4 1090 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 HDAC8Q9BY41 377 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 ABCG4Q9H172 646 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms