RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 NUDT18Q6ZVK8 323 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 SYDE1Q6ZW31 735 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-206ENST00000454852 RNF135Q8IUD6 432 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 GRK7Q8WTQ7 553 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 P2RY13Q9BPV8 354 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 DDX47Q9H0S4 455 aaKnown RBP11.48□□□□□ -0.57
TRAF4-206ENST00000454852 SP110Q9HB58 689 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 PIAS3Q9Y6X2 628 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 MIA3Q5JRA6 1907 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 PRRT4C9JH25 899 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 J3KR12 359 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 MAN2B1O00754 1011 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 TRIM24O15164 1050 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 APODP05090 189 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 ATP5BP06576 529 aaKnown RBP11.47□□□□□ -0.57
TRAF4-206ENST00000454852 DLDP09622 509 aaKnown RBP11.47□□□□□ -0.57
TRAF4-206ENST00000454852 CCNB1P14635 433 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 HNRNPLP14866 589 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRAF4-206ENST00000454852 POLR2EP19388 210 aaKnown RBP11.47□□□□□ -0.57
TRAF4-206ENST00000454852 DRD1P21728 446 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 PTPN3P26045 913 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 HSPA9P38646 679 aaKnown RBP11.47□□□□□ -0.57
TRAF4-206ENST00000454852 SERPINH1P50454 418 aaKnown RBP11.47□□□□□ -0.57
TRAF4-206ENST00000454852 GALK1P51570 392 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 RENBPP51606 427 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 ECT2LQ008S8 904 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 MESP2Q0VG99 397 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 AP1B1Q10567 949 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 ENPP2Q13822 863 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 PTPRNQ16849 979 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 SLC44A4Q53GD3 710 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 GLE1Q53GS7 698 aaKnown RBP11.47□□□□□ -0.57
TRAF4-206ENST00000454852 TEX44Q53QW1 395 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 TXNDC11Q6PKC3 985 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 C4orf22Q6V702 233 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 KLHDC8BQ8IXV7 354 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 PLPP6Q8IY26 295 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 GJD3Q8N144 294 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 NETO2Q8NC67 525 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 CCNYQ8ND76 341 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 ISG20Q96AZ6 181 aaKnown RBP11.47□□□□□ -0.57
TRAF4-206ENST00000454852 MRGPRX3Q96LB0 322 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 TEKT5Q96M29 485 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 PSKH2Q96QS6 385 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 FAM118BQ9BPY3 351 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 TMEM121Q9BTD3 319 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 SPON2Q9BUD6 331 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 CARD6Q9BX69 1037 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 CEP44Q9C0F1 390 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 HEBP1Q9NRV9 189 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 ELOVL2Q9NXB9 296 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 UBA2Q9UBT2 640 aaPredicted RBP11.47□□□□□ -0.57
TRAF4-206ENST00000454852 TRHDEQ9UKU6 1024 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 COL6A3P12111 3177 aa11.47□□□□□ -0.57
TRAF4-206ENST00000454852 UNC80Q8N2C7 3258 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.46□□□□□ -0.57
TRAF4-206ENST00000454852 FAM187AA6NFU0 413 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 BHMG1C9JSJ3 638 aaPredicted RBP11.46□□□□□ -0.57
TRAF4-206ENST00000454852 CBX4O00257 560 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 ATP9BO43861 1147 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 SNAP91O60641 907 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 OPHN1O60890 802 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 STK10O94804 968 aaKnown RBP11.46□□□□□ -0.57
TRAF4-206ENST00000454852 GAS8O95995 478 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 SRCP12931 536 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 CES1P23141 567 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 GLDCP23378 1020 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 KCNJ1P48048 391 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 SOX9P48436 509 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 GDF10P55107 478 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 STARD6P59095 220 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 C2orf54Q08AI8 447 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 NSUN2Q08J23 767 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAF4-206ENST00000454852 SLC10A7Q0GE19 358 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 SNX1Q13596 522 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 LBRQ14739 615 aaKnown RBP11.46□□□□□ -0.57
TRAF4-206ENST00000454852 MLF2Q15773 248 aaPredicted RBP11.46□□□□□ -0.57
TRAF4-206ENST00000454852 SLC14A2Q15849 920 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 FBXO43Q4G163 708 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 RALGPS1Q5JS13 557 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 TJAP1Q5JTD0 557 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 MARC1Q5VT66 337 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 MAATS1Q7Z4T9 603 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 CCDC105Q8IYK2 499 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 ZNF687Q8N1G0 1237 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 SH2D3CQ8N5H7 860 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 CCDC33Q8N5R6 958 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 CNTD1Q8N815 330 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 CCDC26Q8TAB7 109 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 TTC8Q8TAM2 541 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 CCHCR1Q8TD31 782 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 NSMCE1Q8WV22 266 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 UCMAQ8WVF2 138 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 EZH1Q92800 747 aaPredicted RBP11.46□□□□□ -0.57
TRAF4-206ENST00000454852 MYO19Q96H55 970 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 ZNF419Q96HQ0 510 aaPredicted RBP11.46□□□□□ -0.57
TRAF4-206ENST00000454852 SPATA13Q96N96 652 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 KRT12Q99456 494 aa11.46□□□□□ -0.57
TRAF4-206ENST00000454852 PCDH9Q9HC56 1237 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms