RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ZSCAN5CA6NGD5 496 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-205ENST00000454542 SOWAHDA6NJG2 315 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 RASA4BC9J798 803 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 K7ERQ8 282 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 CBX4O00257 560 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 RASA4O43374 803 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 ADH1BP00325 375 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 ERCC2P18074 760 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 OXTRP30559 389 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 CYLC1P35663 651 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-205ENST00000454542 ARHGAP25P42331 645 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 NDST2P52849 883 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 GEMIN4P57678 1058 aaKnown RBP14.47□□□□□ -0.09
HDAC4-205ENST00000454542 TAS2R40P59535 323 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 SERINC3Q13530 473 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 POLD3Q15054 466 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-205ENST00000454542 IL31Q6EBC2 164 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 LINGO4Q6UY18 593 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 LPCAT2Q7L5N7 544 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 TMTC1Q8IUR5 882 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 SLC41A1Q8IVJ1 513 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 DCLK2Q8N568 766 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 PCDH20Q8N6Y1 951 aaKnown RBP14.47□□□□□ -0.09
HDAC4-205ENST00000454542 NPWQ8N729 165 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 ATP11CQ8NB49 1132 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 OR2A12Q8NGT7 310 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 SLC35G2Q8TBE7 412 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 VOPP1Q96AW1 172 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 ISG20Q96AZ6 181 aaKnown RBP14.47□□□□□ -0.09
HDAC4-205ENST00000454542 HMCESQ96FZ2 354 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 CSPG4P5Q96PW8 444 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 PCED1AQ9H1Q7 454 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 ZWILCHQ9H900 591 aa14.47□□□□□ -0.09
HDAC4-205ENST00000454542 EP300Q09472 2414 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-205ENST00000454542 PCDH15Q96QU1 1955 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 A0A0A6YYK5 440 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-205ENST00000454542 H3BRJ5 948 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 MCF2LO15068 1137 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 MID1O15344 667 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 KDELR3O43731 214 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 NDUFA10O95299 355 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 DNTTP04053 509 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 CTSLP07711 333 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 ACADMP11310 421 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 HOXD12P35452 270 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 DRD3P35462 400 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 MPLP40238 635 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 PTGER3P43115 390 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 RPL6Q02878 288 aaKnown RBP14.46□□□□□ -0.09
HDAC4-205ENST00000454542 HADHQ16836 314 aaKnown RBP14.46□□□□□ -0.09
HDAC4-205ENST00000454542 PPP6R3Q5H9R7 873 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-205ENST00000454542 RAD9BQ6WBX8 426 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 PLPP6Q8IY26 295 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 AADATQ8N5Z0 425 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 CASKIN2Q8WXE0 1202 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 OR8D1Q8WZ84 308 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 HSPH1Q92598 858 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 FAF2Q96CS3 445 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 TOE1Q96GM8 510 aaKnown RBP14.46□□□□□ -0.09
HDAC4-205ENST00000454542 ZNF419Q96HQ0 510 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-205ENST00000454542 SPON2Q9BUD6 331 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 SERGEFQ9UGK8 458 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 PPM1HQ9ULR3 514 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 FZD4Q9ULV1 537 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 REXO2Q9Y3B8 237 aaKnown RBP14.46□□□□□ -0.09
HDAC4-205ENST00000454542 ACTL7AQ9Y615 435 aa14.46□□□□□ -0.09
HDAC4-205ENST00000454542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 RNASEH1O60930 286 aaKnown RBP14.45□□□□□ -0.1
HDAC4-205ENST00000454542 C5AR1P21730 350 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 IL4RP24394 825 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 ARL4AP40617 200 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 DPP6P42658 865 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 MAGEA1P43355 309 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 PSMD8P48556 350 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 DPYSL3Q14195 570 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 CSRP2Q16527 193 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 LYSMD4Q5XG99 296 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 DSG4Q86SJ6 1040 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 MMAAQ8IVH4 418 aaKnown RBP14.45□□□□□ -0.1
HDAC4-205ENST00000454542 TMEFF1Q8IYR6 380 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 LZTR1Q8N653 840 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 GPR161Q8N6U8 529 aaKnown RBP14.45□□□□□ -0.1
HDAC4-205ENST00000454542 CADM4Q8NFZ8 388 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 CCDC114Q96M63 670 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 ZNF670Q9BS34 389 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 ARRDC1-AS1Q9H2J1 176 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 SGK2Q9HBY8 427 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 ETNK2Q9NVF9 386 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 SARDHQ9UL12 918 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 FCF1Q9Y324 198 aaKnown RBP14.45□□□□□ -0.1
HDAC4-205ENST00000454542 PCDHA13Q9Y5I0 950 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 EPN1Q9Y6I3 576 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-205ENST00000454542 WASF2Q9Y6W5 498 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 NUMA1Q14980 2115 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 CFAP54Q96N23 3096 aa14.45□□□□□ -0.1
HDAC4-205ENST00000454542 ZNF487B1APH4 448 aa14.44□□□□□ -0.1
HDAC4-205ENST00000454542 PRAMEF11O60813 436 aa14.44□□□□□ -0.1
HDAC4-205ENST00000454542 TMCC1O94876 653 aa14.44□□□□□ -0.1
HDAC4-205ENST00000454542 GSRP00390 522 aa14.44□□□□□ -0.1
HDAC4-205ENST00000454542 KRT7P08729 469 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms