RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 FAM72BQ86X60 149 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 MFN1Q8IWA4 741 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 PLD5Q8N7P1 536 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 CCDC89Q8N998 374 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 VN1R2Q8NFZ6 395 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 ACTL9Q8TC94 416 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 UTP4Q969X6 686 aaKnown RBP16.21■□□□□ 0.19
SNX17-204ENST00000453453 CYP2S1Q96SQ9 504 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 TASP1Q9H6P5 420 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 SMPD4Q9NXE4 827 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 R3HDM2Q9Y2K5 976 aaKnown RBP16.21■□□□□ 0.19
SNX17-204ENST00000453453 MRPS23Q9Y3D9 190 aaKnown RBP16.21■□□□□ 0.19
SNX17-204ENST00000453453 SNX10Q9Y5X0 201 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 CPQQ9Y646 472 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 ANKRD33BA6NCL7 494 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 A8MUI8 341 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 E9PAM4 449 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 ACSL4O60488 711 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 PAPLNO95428 1278 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 ASMTLO95671 621 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 LATS1O95835 1130 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 TPBGLP0DKB5 382 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 CCR2P41597 374 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 ABL2P42684 1182 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 NR2C2P49116 596 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 ITGA8P53708 1063 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 MPP2Q14168 576 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 RBBP5Q15291 538 aaKnown RBP16.2■□□□□ 0.18
SNX17-204ENST00000453453 ZRSR2Q15696 482 aaKnown RBP16.2■□□□□ 0.18
SNX17-204ENST00000453453 RARS2Q5T160 578 aaKnown RBP16.2■□□□□ 0.18
SNX17-204ENST00000453453 DRICH1Q6PGQ1 229 aaPredicted RBP16.2■□□□□ 0.18
SNX17-204ENST00000453453 C1orf228Q6PIY5 440 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 C12orf76Q8N812 135 aaPredicted RBP16.2■□□□□ 0.18
SNX17-204ENST00000453453 ZFAND2BQ8WV99 257 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 ATG4AQ8WYN0 398 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 TCEAL4Q96EI5 215 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 LRRC37BQ96QE4 947 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 MYLK2Q9H1R3 596 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 PRDM12Q9H4Q4 367 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 GKN1Q9NS71 199 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 XPO7Q9UIA9 1087 aaKnown RBP16.2■□□□□ 0.18
SNX17-204ENST00000453453 COLQQ9Y215 455 aaPredicted RBP16.2■□□□□ 0.18
SNX17-204ENST00000453453 ZNF510Q9Y2H8 683 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 NEU2Q9Y3R4 380 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 HEY1Q9Y5J3 304 aa16.2■□□□□ 0.18
SNX17-204ENST00000453453 F5H5T6 163 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 LIASO43766 372 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 LINGO3P0C6S8 592 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 ERCC2P18074 760 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 TACR2P21452 398 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 CHKAP35790 457 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 VCPP55072 806 aaKnown RBP16.19■□□□□ 0.18
SNX17-204ENST00000453453 EIF3EP60228 445 aaKnown RBP16.19■□□□□ 0.18
SNX17-204ENST00000453453 PDK4Q16654 411 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 SLC45A4Q5BKX6 768 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 PRSS36Q5K4E3 855 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 AP1ARQ63HQ0 302 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 RAP1GAP2Q684P5 730 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 DENND1CQ8IV53 801 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 DENND1AQ8TEH3 1009 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 MAML1Q92585 1016 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 SLC22A12Q96S37 553 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 PHACTR1Q9C0D0 580 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 DCLRE1BQ9H816 532 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 FETUBQ9UGM5 382 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 VANGL2Q9ULK5 521 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 ZNF148Q9UQR1 794 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 SH3BP1Q9Y3L3 701 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 RAD54BQ9Y620 910 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 DOCK6Q96HP0 2047 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 NOTCH4Q99466 2003 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 C2orf16Q68DN1 1984 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 KLHL33A6NCF5 533 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 EDF1O60869 148 aaKnown RBP16.19■□□□□ 0.18
SNX17-204ENST00000453453 PECAM1P16284 738 aaPredicted RBP16.19■□□□□ 0.18
SNX17-204ENST00000453453 HOXB8P17481 243 aaPredicted RBP16.19■□□□□ 0.18
SNX17-204ENST00000453453 HOXC13P31276 330 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 KCNJ1P48048 391 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 NTHL1P78549 312 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 NOMO1Q15155 1222 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 SLC5A9Q2M3M2 681 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 RABGAP1LQ5R372 815 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 STXBP5Q5T5C0 1151 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 MANEALQ5VSG8 457 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 NCBP2-AS2Q69YL0 99 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 IRGCQ6NXR0 463 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 ANKRD54Q6NXT1 300 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 TRABD2AQ86V40 505 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 CMTM8Q8IZV2 173 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 ZCCHC9Q8N567 271 aaKnown RBP16.19■□□□□ 0.18
SNX17-204ENST00000453453 GDAP1Q8TB36 358 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 NKD2Q969F2 451 aaPredicted RBP16.19■□□□□ 0.18
SNX17-204ENST00000453453 ZFRQ96KR1 1074 aaKnown RBP16.19■□□□□ 0.18
SNX17-204ENST00000453453 FAM118BQ9BPY3 351 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 SLC46A2Q9BY10 475 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 ZYG11BQ9C0D3 744 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 PPARGC1AQ9UBK2 798 aaKnown RBP16.19■□□□□ 0.18
SNX17-204ENST00000453453 ARHGAP26Q9UNA1 814 aa16.19■□□□□ 0.18
SNX17-204ENST00000453453 LAMA2P24043 3122 aaKnown RBP16.18■□□□□ 0.18
SNX17-204ENST00000453453 H7C0C1 242 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms