RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 H0Y8X5 98 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 CBX4O00257 560 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 PLK4O00444 970 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 RTN2O75298 545 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 ENDOD1O94919 500 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 KRT3P12035 628 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 UNGP13051 313 aaPredicted RBP13.2□□□□□ -0.3
CHD3-206ENST00000452447 RRM1P23921 792 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 RECQLP46063 649 aaPredicted RBP13.2□□□□□ -0.3
CHD3-206ENST00000452447 METAP1P53582 386 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 C15orf59Q2T9L4 293 aaPredicted RBP13.2□□□□□ -0.3
CHD3-206ENST00000452447 RETSATQ6NUM9 610 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 GLRX5Q86SX6 157 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 ERGIC2Q96RQ1 377 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 SELENOOQ9BVL4 669 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 PPARGC1AQ9UBK2 798 aaKnown RBP13.2□□□□□ -0.3
CHD3-206ENST00000452447 OR12D3Q9UGF7 316 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 KLK13Q9UKR3 277 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 MSRB2Q9Y3D2 182 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 DMXL2Q8TDJ6 3036 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 C2CD4BA6NLJ0 364 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 K7ERQ8 282 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 PLRG1O43660 514 aaKnown RBP13.19□□□□□ -0.3
CHD3-206ENST00000452447 PCDHGA12O60330 932 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 KRT37O76014 449 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 CALB1P05937 261 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 CCDC172P0C7W6 258 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 CHRNA3P32297 505 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 ADRA1BP35368 520 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 GRK6P43250 576 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 PPP2CBP62714 309 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 PPP2CAP67775 309 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 TYRO3Q06418 890 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 CNTN1Q12860 1018 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 INAVAQ3KP66 663 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 CCDC14Q49A88 953 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 KCNT1Q5JUK3 1230 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 RWDD4Q6NW29 188 aaKnown RBP13.19□□□□□ -0.3
CHD3-206ENST00000452447 LINGO4Q6UY18 593 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 RAB44Q7Z6P3 723 aaPredicted RBP13.19□□□□□ -0.3
CHD3-206ENST00000452447 DRC7Q8IY82 874 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 OR7D4Q8NG98 312 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 ADAMTS14Q8WXS8 1223 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 FAM131CQ96AQ9 280 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 PCDHB18PQ96TA0 734 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 ATP13A1Q9HD20 1204 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 DYRK4Q9NR20 520 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
CHD3-206ENST00000452447 ARID1BQ8NFD5 2236 aaPredicted RBP13.18□□□□□ -0.3
CHD3-206ENST00000452447 FREM2Q5SZK8 3169 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 ANKRD11Q6UB99 2663 aaPredicted RBP13.18□□□□□ -0.3
CHD3-206ENST00000452447 CHD5Q8TDI0 1954 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 ANKRD62A6NC57 917 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 TMEM8BA6NDV4 472 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
CHD3-206ENST00000452447 SMAD6O43541 496 aaKnown RBP13.18□□□□□ -0.3
CHD3-206ENST00000452447 LATO43561 262 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 PRNPP04156 253 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 WNT1P04628 370 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 MAT2AP31153 395 aaKnown RBP13.18□□□□□ -0.3
CHD3-206ENST00000452447 NUDT1P36639 197 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 ETFBP38117 255 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 PTPN9P43378 593 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 IL9RQ01113 521 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 GNA12Q03113 381 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 SLC20A2Q08357 652 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 NCAPHQ15003 741 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 CLEC16AQ2KHT3 1053 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 AGBL4Q5VU57 503 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 PHF13Q86YI8 300 aaPredicted RBP13.18□□□□□ -0.3
CHD3-206ENST00000452447 AOPEPQ8N6M6 819 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 TMIEQ8NEW7 156 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 OR2A12Q8NGT7 310 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 JOSD2Q8TAC2 188 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 GATA6Q92908 595 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 ELF4Q99607 663 aaPredicted RBP13.18□□□□□ -0.3
CHD3-206ENST00000452447 ZZEF1O43149 2961 aa13.18□□□□□ -0.3
CHD3-206ENST00000452447 TDRD6O60522 2096 aaKnown RBP13.18□□□□□ -0.3
CHD3-206ENST00000452447 PTPRBP23467 1997 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 CHD6Q8TD26 2715 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 A0A1B0GTQ1 180 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 WNT9AO14904 365 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 GJB6O95452 261 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 CTSLP07711 333 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 GLDCP23378 1020 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 RFC1P35251 1148 aaPredicted RBP13.17□□□□□ -0.3
CHD3-206ENST00000452447 DNA2P51530 1060 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 STAT4Q14765 748 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 SETMARQ53H47 684 aaPredicted RBP13.17□□□□□ -0.3
CHD3-206ENST00000452447 RAB6CQ53S08 254 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 PRAMEF14Q5SWL7 426 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 NAPEPLDQ6IQ20 393 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 C22orf39Q6P5X5 142 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 SLCO6A1Q86UG4 719 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 TRIM69Q86WT6 500 aa13.17□□□□□ -0.3
CHD3-206ENST00000452447 MFSD2AQ8NA29 543 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms