RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CCRL2O00421 344 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 AREL1O15033 823 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 PLIN3O60664 434 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 GLRA3O75311 464 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 DEAF1O75398 565 aaPredicted RBP8.76□□□□□ -1.01
LSM5-208ENST00000450169 SEC14L2O76054 403 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 UGT2B4P06133 528 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 RALBP11234 206 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 CDH1P12830 882 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 YBX3P16989 372 aaKnown RBP eCLIP8.76□□□□□ -1.016e-9■□□□□ 9
LSM5-208ENST00000450169 PROZP22891 400 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 RHBDL3P58872 404 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 STX1BP61266 288 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 ECT2LQ008S8 904 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 PRKCQQ04759 706 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 TNK2Q07912 1038 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 DPYSL3Q14195 570 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 TRIM25Q14258 630 aaKnown RBP8.76□□□□□ -1.01
LSM5-208ENST00000450169 HERC3Q15034 1050 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 CDONQ4KMG0 1287 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 TWF2Q6IBS0 349 aaKnown RBP8.76□□□□□ -1.01
LSM5-208ENST00000450169 AGMOQ6ZNB7 445 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 ZNF677Q86XU0 584 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 UNC45BQ8IWX7 931 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 PARP8Q8N3A8 854 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 NATD1Q8N6N6 113 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 PACRGLQ8N7B6 248 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 LSMEM1Q8N8F7 131 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 FEZF2Q8TBJ5 459 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 TOP1MTQ969P6 601 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 ELMO3Q96BJ8 720 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 NRBF2Q96F24 287 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 CDK5RAP1Q96SZ6 601 aaKnown RBP8.76□□□□□ -1.01
LSM5-208ENST00000450169 ACO2Q99798 780 aaKnown RBP8.76□□□□□ -1.01
LSM5-208ENST00000450169 OR2B2Q9GZK3 357 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 EFCAB1Q9HAE3 211 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 FANCEQ9HB96 536 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 POLE4Q9NR33 117 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 ADA2Q9NZK5 511 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 HSPBP1Q9NZL4 362 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 VAV3Q9UKW4 847 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 AGTPBP1Q9UPW5 1226 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 PCDHAC2Q9Y5I4 1007 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 DGKBQ9Y6T7 804 aa8.76□□□□□ -1.01
LSM5-208ENST00000450169 ARHGEF35A5YM69 484 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 SAC3D1A6NKF1 404 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ERVV-1B6SEH8 477 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 K7ENM7 598 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 DLGAP1O14490 977 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 KCNQ2O43526 872 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 DYRK3O43781 588 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TADA2AO75478 443 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 BMP2P12643 396 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 NCAM1P13591 858 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 PTPN9P43378 593 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 NAMPTP43490 491 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 SERPINB9P50453 376 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 YWHAZP63104 245 aaKnown RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 CLCQ05315 142 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TRIM32Q13049 653 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TUBA3CQ13748 450 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 SLC36A3Q495N2 470 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TXNRD3NBQ6F5E7 133 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 KIAA0408Q6ZU52 694 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 CHST15Q7LFX5 561 aaPredicted RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 TAS1R3Q7RTX0 852 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 CAMK1DQ8IU85 385 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ARMC8Q8IUR7 673 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 LRRC47Q8N1G4 583 aaKnown RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 CBR4Q8N4T8 237 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ZNF781Q8N8C0 355 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ASCC1Q8N9N2 400 aaKnown RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 ADAM32Q8TC27 787 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 PNPT1Q8TCS8 783 aaKnown RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 MAPK15Q8TD08 544 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 OSCP1Q8WVF1 389 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 CYGBQ8WWM9 190 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ATL1Q8WXF7 558 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 SNX19Q92543 992 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 CELF1Q92879 486 aaKnown RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 LENG9Q96B70 501 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 FAM20AQ96MK3 541 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 CSF3RQ99062 836 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TCF12Q99081 682 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 DHRS9Q9BPW9 319 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 STRA6Q9BX79 667 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 FRMD8P1Q9BZ68 369 aaPredicted RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 PCDHAC1Q9H158 963 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ADAMTS10Q9H324 1103 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 RNPEPQ9H4A4 650 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 POPDC2Q9HBU9 364 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 MRGBPQ9NV56 204 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 COPG2Q9UBF2 871 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ENPP5Q9UJA9 477 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 TRPC5Q9UL62 973 aaPredicted RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 TESMINQ9Y4I5 508 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 RBBP6Q7Z6E9 1792 aaKnown RBP8.75□□□□□ -1.01
LSM5-208ENST00000450169 ZBTB39O15060 712 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 ZBTB5O15062 677 aa8.75□□□□□ -1.01
LSM5-208ENST00000450169 SNPHO15079 494 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms