RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 EIF2B4Q9UI10 523 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SNX7Q9UNH6 387 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 DUSP10Q9Y6W6 482 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 AHCTF1Q8WYP5 2266 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRIP11Q15643 1979 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 XPO1O14980 1071 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ADKP55263 362 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC6A3Q01959 620 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 EHHADHQ08426 723 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 AVL9Q8NBF6 648 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 OR5B17Q8NGF7 314 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 TPCN2Q8NHX9 752 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 RXFP2Q8WXD0 754 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 PCED1BQ96HM7 432 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 TMEM74Q96NL1 305 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 WRAP53Q9BUR4 548 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 RAB17Q9H0T7 212 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SNX6Q9UNH7 406 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 OAS3Q9Y6K5 1087 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ITGB4P16144 1822 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 HEATR9A2RTY3 570 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 HIDE1A8MVS5 230 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM163BP0C2L3 166 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 GRK6P43250 576 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CENPAP49450 140 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 GEMP55040 296 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ARG2P78540 354 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC20A2Q08357 652 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 HIST2H2ACQ16777 129 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 RTP2Q5QGT7 225 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 HIST2H2AA3Q6FI13 130 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM109BQ6ICB4 259 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 KLHL7Q8IXQ5 586 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CCDC170Q8IYT3 715 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 BSNDQ8WZ55 320 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CCNL2Q96S94 520 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 HAUS4Q9H6D7 363 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 E2F8A0AVK6 867 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM221BA6H8Z2 402 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 FGF10O15520 208 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 PIK3R6Q5UE93 754 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ALS2CLQ60I27 953 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 MBLAC2Q68D91 279 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 PIM3Q86V86 326 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZC3H18Q86VM9 953 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 PARP9Q8IXQ6 854 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TTC29Q8NA56 475 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 BTN2A2Q8WVV5 523 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 RTKNQ9BST9 563 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ATP6V1HQ9UI12 483 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 BCAT2O15382 392 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 DHX15O43143 795 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLEC3AO75596 197 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 AKAP3O75969 853 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 MYO1DO94832 1006 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 MICAL2O94851 1124 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 LAMP2P13473 410 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC9A1P19634 815 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 GLDCP23378 1020 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZXDAP98168 799 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 LBRQ14739 615 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 BRMS1LQ5PSV4 323 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CENPPQ6IPU0 288 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TMPRSS6Q8IU80 811 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TATDN2Q93075 761 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TMEM159Q96B96 161 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 BBS4Q96RK4 519 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRIM7Q9C029 511 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 EPHX3Q9H6B9 360 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 KCNK12Q9HB15 430 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 RBM22Q9NW64 420 aaKnown RBP eCLIP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 SATB2Q9UPW6 733 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TISP43B9A030 160 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 LEFTY2O00292 366 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 MDM4O15151 490 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 RGS20O76081 388 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CXCL10P02778 98 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC1A1P43005 524 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 MAGEA11P43364 429 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TNFRSF4P43489 277 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF268Q14587 947 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 PTPN21Q16825 1174 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 EARS2Q5JPH6 523 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM26DQ5JW98 314 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 KCNK18Q7Z418 384 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 AHI1Q8N157 1196 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 OR2W6PQ8NHA6 318 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 HEPHQ9BQS7 1158 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 MRPL45Q9BRJ2 306 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 NDC1Q9BTX1 674 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 COLEC10Q9Y6Z7 277 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 LCHNA4D1U4 455 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 LRRIQ3A6PVS8 624 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 LILRB3O75022 631 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CRTAMO95727 393 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 PYGLP06737 847 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 WARSP23381 471 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CTGFP29279 349 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 MPLP40238 635 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CCR10P46092 362 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms