RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 PPIGQ13427 754 aaKnown RBP eCLIP10.78□□□□□ -0.688e-7■■■□□ 16.4
VIPAS39-203ENST00000448935 SPARCL1Q14515 664 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 EFTUD2Q15029 972 aaKnown RBP eCLIP10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 SEPT7Q16181 437 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 PARP15Q460N3 678 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 RAP1GAP2Q684P5 730 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 FAM117BQ6P1L5 589 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 ITIH5Q86UX2 942 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 TAX1BP1Q86VP1 789 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 TCEAL8Q8IYN2 117 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 PPM1NQ8N819 430 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 CKAP2Q8WWK9 683 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 RPRD1AQ96P16 312 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 DDX50Q9BQ39 737 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 IL22Q9GZX6 179 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 FAM107BQ9H098 131 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 CCSER2Q9H7U1 834 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 GLOD4Q9HC38 313 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 MOCS1Q9NZB8 636 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 MPP6Q9NZW5 540 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 PCDH10Q9P2E7 1040 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 PRKAG2Q9UGJ0 569 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 IPO11Q9UI26 975 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 GGA2Q9UJY4 613 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 CCDC85CA6NKD9 419 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 TM9SF1O15321 606 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 ACSL4O60488 711 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 SEC24AO95486 1093 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 HMBSP08397 361 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 CREB1P16220 341 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 KRT4P19013 534 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 TACR2P21452 398 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 CCT5P48643 541 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 MLLT1Q03111 559 aaPredicted RBP10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 DNAJC3Q13217 504 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 C5orf22Q49AR2 442 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 PABPC1LQ4VXU2 614 aaKnown RBP10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 RABGAP1LQ5R372 815 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 ARTNQ5T4W7 220 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 GKAP1Q5VSY0 366 aaPredicted RBP10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 FBXL22Q6P050 247 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 BLOC1S3Q6QNY0 202 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 MARK2Q7KZI7 788 aaKnown RBP10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 CCDC117Q8IWD4 279 aaPredicted RBP10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 FIBCD1Q8N539 461 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 OR52K1Q8NGK4 314 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 ZSCAN18Q8TBC5 510 aaPredicted RBP10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 MGARPQ8TDB4 240 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 ZFRQ96KR1 1074 aaKnown RBP10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 MAGEB18Q96M61 343 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 PRR14Q9BWN1 585 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 SP110Q9HB58 689 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 ENTPD7Q9NQZ7 604 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 RBM22Q9NW64 420 aaKnown RBP eCLIP10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 MAP10Q9P2G4 905 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 ASB3Q9Y575 518 aa10.77□□□□□ -0.68
VIPAS39-203ENST00000448935 NYNRINQ9P2P1 1898 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-203ENST00000448935 KIAA1671Q9BY89 1806 aa10.77□□□□□ -0.69
VIPAS39-203ENST00000448935 F5H423 210 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 TYROBPO43914 113 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 RAMP2O60895 175 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 USP1O94782 785 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 FGBP02675 491 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 C1QAP02745 245 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 VIMP08670 466 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 HMGA1P17096 107 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 HNRNPH2P55795 449 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 IL10RBQ08334 325 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 MGAT5Q09328 741 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 CRYMQ14894 314 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 POLD3Q15054 466 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 HHATQ5VTY9 493 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 PRPF39Q86UA1 669 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 MPP5Q8N3R9 675 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 CNTD1Q8N815 330 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 USP33Q8TEY7 942 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 MZB1Q8WU39 189 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 ARNTL2Q8WYA1 636 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF317Q96PQ6 595 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 MLPHQ9BV36 600 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 RXFP1Q9HBX9 757 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 SYBUQ9NX95 663 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 TXNDC16Q9P2K2 825 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 FAM237BA0A1B0GVD1 139 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 A0A1W2PPM1 405 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 SPAG7O75391 227 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 LATS1O95835 1130 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 ACRP10323 421 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 DRD4P21917 467 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 ITGB8P26012 769 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 OR1E1P30953 314 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 HTRA4P83105 476 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 TNK2Q07912 1038 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 TWF1Q12792 350 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 MPP3Q13368 585 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 LRRC14Q15048 493 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 PTPRNQ16849 979 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 FAM182AQ5T1J6 154 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 MARC1Q5VT66 337 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms