RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 HAPLN1P10915 354 aaPredicted RBP15.07■□□□□ 0
SF1-211ENST00000448404 RPL9P32969 192 aaKnown RBP15.07■□□□□ 0
SF1-211ENST00000448404 SKIV2L2P42285 1042 aaKnown RBP15.07■□□□□ 0
SF1-211ENST00000448404 RIPK1Q13546 671 aa15.07■□□□□ 0
SF1-211ENST00000448404 PTPRCAPQ14761 206 aa15.07■□□□□ 0
SF1-211ENST00000448404 CNGA3Q16281 694 aa15.07■□□□□ 0
SF1-211ENST00000448404 PIK3R6Q5UE93 754 aa15.07■□□□□ 0
SF1-211ENST00000448404 TMEM173Q86WV6 379 aaPredicted RBP15.07■□□□□ 0
SF1-211ENST00000448404 SLC41A1Q8IVJ1 513 aa15.07■□□□□ 0
SF1-211ENST00000448404 TTC16Q8NEE8 873 aa15.07■□□□□ 0
SF1-211ENST00000448404 SH3RF2Q8TEC5 729 aa15.07■□□□□ 0
SF1-211ENST00000448404 HDAC11Q96DB2 347 aa15.07■□□□□ 0
SF1-211ENST00000448404 ZNF570Q96NI8 536 aa15.07■□□□□ 0
SF1-211ENST00000448404 SLC9A7Q96T83 725 aa15.07■□□□□ 0
SF1-211ENST00000448404 FAM167BQ9BTA0 163 aa15.07■□□□□ 0
SF1-211ENST00000448404 RBM22Q9NW64 420 aaKnown RBP eCLIP15.07■□□□□ 01e-7■■■■■ 53.2
SF1-211ENST00000448404 GMIPQ9P107 970 aa15.07■□□□□ 0
SF1-211ENST00000448404 NEMP1O14524 444 aa15.07■□□□□ 0
SF1-211ENST00000448404 TNFRSF10BO14763 440 aa15.07■□□□□ 0
SF1-211ENST00000448404 KIF3CO14782 793 aa15.07■□□□□ 0
SF1-211ENST00000448404 SERPINB9P50453 376 aa15.07■□□□□ 0
SF1-211ENST00000448404 TSPY1Q01534 308 aa15.07■□□□□ 0
SF1-211ENST00000448404 ITKQ08881 620 aa15.07■□□□□ 0
SF1-211ENST00000448404 C11orf91Q3C1V1 193 aa15.07■□□□□ 0
SF1-211ENST00000448404 ATG16L1Q676U5 607 aa15.07■□□□□ 0
SF1-211ENST00000448404 TRIM68Q6AZZ1 485 aa15.07■□□□□ 0
SF1-211ENST00000448404 TMEM135Q86UB9 458 aa15.07■□□□□ 0
SF1-211ENST00000448404 ZNF781Q8N8C0 355 aa15.07■□□□□ 0
SF1-211ENST00000448404 MAPK15Q8TD08 544 aa15.07■□□□□ 0
SF1-211ENST00000448404 DPF3Q92784 378 aa15.07■□□□□ 0
SF1-211ENST00000448404 VPS39Q96JC1 886 aa15.07■□□□□ 0
SF1-211ENST00000448404 NDNQ99608 321 aa15.07■□□□□ 0
SF1-211ENST00000448404 RBBP8Q99708 897 aa15.07■□□□□ 0
SF1-211ENST00000448404 FERMT1Q9BQL6 677 aa15.07■□□□□ 0
SF1-211ENST00000448404 EIF2B3Q9NR50 452 aaKnown RBP15.07■□□□□ 0
SF1-211ENST00000448404 PRRC2BQ5JSZ5 2229 aaKnown RBP15.07■□□□□ 0
SF1-211ENST00000448404 CA12O43570 354 aa15.06■□□□□ 0
SF1-211ENST00000448404 MAFKO60675 156 aa15.06■□□□□ 0
SF1-211ENST00000448404 PIRTP0C851 137 aa15.06■□□□□ 0
SF1-211ENST00000448404 CKBP12277 381 aa15.06■□□□□ 0
SF1-211ENST00000448404 PAPOLAP51003 745 aaKnown RBP15.06■□□□□ 0
SF1-211ENST00000448404 SLC25A3Q00325 362 aa15.06■□□□□ 0
SF1-211ENST00000448404 MPP3Q13368 585 aa15.06■□□□□ 0
SF1-211ENST00000448404 ACSBG2Q5FVE4 666 aa15.06■□□□□ 0
SF1-211ENST00000448404 CCSAPQ6IQ19 270 aaPredicted RBP15.06■□□□□ 0
SF1-211ENST00000448404 RSPO2Q6UXX9 243 aaPredicted RBP15.06■□□□□ 0
SF1-211ENST00000448404 C4orf22Q6V702 233 aa15.06■□□□□ 0
SF1-211ENST00000448404 KCTD4Q8WVF5 259 aa15.06■□□□□ 0
SF1-211ENST00000448404 PABPC5Q96DU9 382 aaKnown RBP15.06■□□□□ 0
SF1-211ENST00000448404 C7orf26Q96N11 449 aa15.06■□□□□ 0
SF1-211ENST00000448404 BTBD10Q9BSF8 475 aa15.06■□□□□ 0
SF1-211ENST00000448404 COPG2Q9UBF2 871 aa15.06■□□□□ 0
SF1-211ENST00000448404 M0QZQ0 153 aa15.06■□□□□ 0
SF1-211ENST00000448404 AHSGP02765 367 aa15.06■□□□□ 0
SF1-211ENST00000448404 CEP97Q8IW35 865 aa15.06■□□□□ 0
SF1-211ENST00000448404 PHTF2Q8N3S3 785 aa15.06■□□□□ 0
SF1-211ENST00000448404 MICAL1Q8TDZ2 1067 aa15.06■□□□□ 0
SF1-211ENST00000448404 MCUR1Q96AQ8 359 aa15.06■□□□□ 0
SF1-211ENST00000448404 MARK4Q96L34 752 aa15.06■□□□□ 0
SF1-211ENST00000448404 FAM161BQ96MY7 647 aa15.06■□□□□ 0
SF1-211ENST00000448404 RAB3IPQ96QF0 476 aaPredicted RBP15.06■□□□□ 0
SF1-211ENST00000448404 GPR62Q9BZJ7 368 aa15.06■□□□□ 0
SF1-211ENST00000448404 NEMP2A6NFY4 417 aa15.05■□□□□ 0
SF1-211ENST00000448404 E9PAM4 449 aa15.05■□□□□ 0
SF1-211ENST00000448404 E9PBE3 544 aa15.05■□□□□ 0
SF1-211ENST00000448404 KLHL41O60662 606 aa15.05■□□□□ 0
SF1-211ENST00000448404 ZNF623O75123 536 aa15.05■□□□□ 0
SF1-211ENST00000448404 RALBP11234 206 aa15.05■□□□□ 0
SF1-211ENST00000448404 TRIM71Q2Q1W2 868 aaKnown RBP15.05■□□□□ 0
SF1-211ENST00000448404 RALGPS1Q5JS13 557 aa15.05■□□□□ 0
SF1-211ENST00000448404 DCLRE1AQ6PJP8 1040 aa15.05■□□□□ 0
SF1-211ENST00000448404 C4orf50Q6ZRC1 276 aa15.05■□□□□ 0
SF1-211ENST00000448404 ZNF598Q86UK7 904 aaKnown RBP15.05■□□□□ 0
SF1-211ENST00000448404 RNF135Q8IUD6 432 aa15.05■□□□□ 0
SF1-211ENST00000448404 MAB21L3Q8N8X9 362 aa15.05■□□□□ 0
SF1-211ENST00000448404 URGCPQ8TCY9 931 aa15.05■□□□□ 0
SF1-211ENST00000448404 PGAP3Q96FM1 320 aaPredicted RBP15.05■□□□□ 0
SF1-211ENST00000448404 SMIM14Q96QK8 99 aa15.05■□□□□ 0
SF1-211ENST00000448404 NOL6Q9H6R4 1146 aaKnown RBP15.05■□□□□ 0
SF1-211ENST00000448404 WDR55Q9H6Y2 383 aaPredicted RBP15.05■□□□□ 0
SF1-211ENST00000448404 CYP4F11Q9HBI6 524 aa15.05■□□□□ 0
SF1-211ENST00000448404 TBC1D13Q9NVG8 400 aa15.05■□□□□ 0
SF1-211ENST00000448404 C15orf41Q9Y2V0 281 aa15.05■□□□□ 0
SF1-211ENST00000448404 KCTD3Q9Y597 815 aa15.05■□□□□ 0
SF1-211ENST00000448404 WASF2Q9Y6W5 498 aa15.05■□□□□ 0
SF1-211ENST00000448404 ZNF236Q9UL36 1845 aa15.05■□□□□ 0
SF1-211ENST00000448404 OR51F1A6NGY5 319 aa15.05■□□□□ -0
SF1-211ENST00000448404 GLRA3O75311 464 aa15.05■□□□□ -0
SF1-211ENST00000448404 JUNP05412 331 aaKnown RBP15.05■□□□□ -0
SF1-211ENST00000448404 CPA3P15088 417 aa15.05■□□□□ -0
SF1-211ENST00000448404 NCF2P19878 526 aaPredicted RBP15.05■□□□□ -0
SF1-211ENST00000448404 ARNTP27540 789 aa15.05■□□□□ -0
SF1-211ENST00000448404 ACLYP53396 1101 aa15.05■□□□□ -0
SF1-211ENST00000448404 MXRA7P84157 204 aa15.05■□□□□ -0
SF1-211ENST00000448404 DENND5AQ6IQ26 1287 aa15.05■□□□□ -0
SF1-211ENST00000448404 PDZD4Q76G19 769 aaPredicted RBP15.05■□□□□ -0
SF1-211ENST00000448404 CFAP52Q8N1V2 620 aa15.05■□□□□ -0
SF1-211ENST00000448404 TEX9Q8N6V9 391 aa15.05■□□□□ -0
SF1-211ENST00000448404 GIPC2Q8TF65 315 aa15.05■□□□□ -0
SF1-211ENST00000448404 INPP5DQ92835 1189 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms