RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TEX44Q53QW1 395 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 PITRM1Q5JRX3 1037 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 ANKRD20A2Q5SQ80 823 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 FAM182AQ5T1J6 154 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 ANKRD20A1Q5TYW2 823 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 MARC1Q5VT66 337 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 ANKRD20A3Q5VUR7 823 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 LEKR1Q6ZMV7 388 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 C12orf40Q86WS4 652 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 ETFBKMTQ8IXQ9 262 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 CSGALNACT1Q8TDX6 532 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 USP33Q8TEY7 942 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 ACDQ96AP0 544 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 SPATA13Q96N96 652 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 ZNF599Q96NL3 588 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 EPC1Q9H2F5 836 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 PDFQ9HBH1 243 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 PAK5Q9P286 719 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 KLHL8Q9P2G9 620 aaPredicted RBP19.92■□□□□ 0.78
SGCE-207ENST00000447873 DEC1Q9P2X7 70 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 MYO18AQ92614 2054 aaKnown RBP19.92■□□□□ 0.78
SGCE-207ENST00000447873 MYO10Q9HD67 2058 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 SNAP91O60641 907 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 PEX11BO96011 259 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 RPL22P35268 128 aaKnown RBP19.91■□□□□ 0.78
SGCE-207ENST00000447873 GPS1Q13098 491 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 DMC1Q14565 340 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 GAB4Q2WGN9 574 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 ARHGEF18Q6ZSZ5 1173 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 PID1Q7Z2X4 250 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 AHI1Q8N157 1196 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 ZNF567Q8N184 647 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 SLC44A3Q8N4M1 653 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.91■□□□□ 0.78
SGCE-207ENST00000447873 MAML1Q92585 1016 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 AGAP3Q96P47 875 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 EPB41L5Q9HCM4 733 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 UBA2Q9UBT2 640 aaPredicted RBP19.91■□□□□ 0.78
SGCE-207ENST00000447873 VPS51Q9UID3 782 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 TRHDEQ9UKU6 1024 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 INTS6Q9UL03 887 aaKnown RBP19.91■□□□□ 0.78
SGCE-207ENST00000447873 COL4A3Q01955 1670 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 TARSL2A2RTX5 802 aaKnown RBP19.91■□□□□ 0.78
SGCE-207ENST00000447873 TRIM24O15164 1050 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 OPHN1O60890 802 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 ZMPSTE24O75844 475 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 CISD3P0C7P0 127 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 SLC6A11P48066 632 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 ARF5P84085 180 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 SLC10A7Q0GE19 358 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 FUT11Q495W5 492 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 TMCO4Q5TGY1 634 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 RETSATQ6NUM9 610 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 C4orf22Q6V702 233 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 IL12RB2Q99665 862 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 DPH5Q9H2P9 285 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 ANKZF1Q9H8Y5 726 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 RBM22Q9NW64 420 aaKnown RBP eCLIP19.91■□□□□ 0.78
SGCE-207ENST00000447873 SLC27A6Q9Y2P4 619 aa19.91■□□□□ 0.78
SGCE-207ENST00000447873 MMP13P45452 471 aa19.9■□□□□ 0.78
SGCE-207ENST00000447873 RFTN1Q14699 578 aaPredicted RBP19.9■□□□□ 0.78
SGCE-207ENST00000447873 LBRQ14739 615 aaKnown RBP19.9■□□□□ 0.78
SGCE-207ENST00000447873 NAA30Q147X3 362 aaPredicted RBP19.9■□□□□ 0.78
SGCE-207ENST00000447873 GRAMD4Q6IC98 578 aa19.9■□□□□ 0.78
SGCE-207ENST00000447873 LINGO4Q6UY18 593 aa19.9■□□□□ 0.78
SGCE-207ENST00000447873 KIAA0907Q7Z7F0 614 aaPredicted RBP19.9■□□□□ 0.78
SGCE-207ENST00000447873 IFT20Q8IY31 132 aa19.9■□□□□ 0.78
SGCE-207ENST00000447873 BBS5Q8N3I7 341 aa19.9■□□□□ 0.78
SGCE-207ENST00000447873 TAB3Q8N5C8 712 aaPredicted RBP19.9■□□□□ 0.78
SGCE-207ENST00000447873 GPR161Q8N6U8 529 aaKnown RBP19.9■□□□□ 0.78
SGCE-207ENST00000447873 LRRC45Q96CN5 670 aa19.9■□□□□ 0.78
SGCE-207ENST00000447873 TEKT5Q96M29 485 aa19.9■□□□□ 0.78
SGCE-207ENST00000447873 SNX24Q9Y343 169 aa19.9■□□□□ 0.78
SGCE-207ENST00000447873 KIAA1549LQ6ZVL6 1849 aa19.9■□□□□ 0.78
SGCE-207ENST00000447873 ESYT3A0FGR9 886 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.89■□□□□ 0.77
SGCE-207ENST00000447873 CTIFO43310 598 aaKnown RBP19.89■□□□□ 0.77
SGCE-207ENST00000447873 ASGR2P07307 311 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 GEMIN4P57678 1058 aaKnown RBP19.89■□□□□ 0.77
SGCE-207ENST00000447873 SULT2A1Q06520 285 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 ZNF235Q14590 738 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 GEN1Q17RS7 908 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 DUPD1Q68J44 220 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 ITPRIPL1Q6GPH6 555 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 ADIPOR2Q86V24 386 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 TEX26Q8N6G2 289 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 WFIKKN2Q8TEU8 576 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 THEGQ9P2T0 379 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 TTLL3Q9Y4R7 772 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 ACTL7AQ9Y615 435 aa19.89■□□□□ 0.77
SGCE-207ENST00000447873 LOC730098B7Z3J9 87 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 ZBTB24O43167 697 aaPredicted RBP19.88■□□□□ 0.77
SGCE-207ENST00000447873 HLA-DQB2P05538 268 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 POLR2EP19388 210 aaKnown RBP19.88■□□□□ 0.77
SGCE-207ENST00000447873 OPRD1P41143 372 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 EIF2DP41214 584 aaKnown RBP19.88■□□□□ 0.77
SGCE-207ENST00000447873 RPL21P46778 160 aaKnown RBP19.88■□□□□ 0.77
SGCE-207ENST00000447873 ELF2Q15723 593 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 MBLAC2Q68D91 279 aa19.88■□□□□ 0.77
SGCE-207ENST00000447873 CNTD1Q8N815 330 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms