RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 HNRNPKP61978 463 aaKnown RBP eCLIP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 NUCB2P80303 420 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 DNM1Q05193 864 aaKnown RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 ZSCAN23Q3MJ62 389 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 SEL1L3Q68CR1 1132 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 ZCCHC8Q6NZY4 707 aaKnown RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 NEK5Q6P3R8 708 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 CRTC1Q6UUV9 634 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 EFL1Q7Z2Z2 1120 aaKnown RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 PTAR1Q7Z6K3 402 aaPredicted RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 CLEC14AQ86T13 490 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 LURAP1LQ8IV03 231 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 SMYD4Q8IYR2 804 aaPredicted RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 SH2D3CQ8N5H7 860 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 KAT5Q92993 513 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 CCDC47Q96A33 483 aaKnown RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 PCDHB4Q9Y5E5 795 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.16■□□□□ 0.02
UBE2F-216ENST00000445676 CPED1A4D0V7 1026 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 A6NNZ2 444 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 EFSO43281 561 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 TRUB2O95900 331 aaKnown RBP15.16■□□□□ 0.02
UBE2F-216ENST00000445676 CMA1P23946 247 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 PDX1P52945 283 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 ZNF177Q13360 481 aaPredicted RBP15.16■□□□□ 0.02
UBE2F-216ENST00000445676 EIF4EBP2Q13542 120 aaPredicted RBP15.16■□□□□ 0.02
UBE2F-216ENST00000445676 FZD2Q14332 565 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 DRAP1Q14919 205 aaPredicted RBP15.16■□□□□ 0.02
UBE2F-216ENST00000445676 STILQ15468 1287 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 ARL13BQ3SXY8 428 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 LINC00303Q3SY05 128 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 TMEM259Q4ZIN3 620 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 TTC39BQ5VTQ0 682 aaPredicted RBP15.16■□□□□ 0.02
UBE2F-216ENST00000445676 FOXR1Q6PIV2 292 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 RBM44Q6ZP01 1051 aaKnown RBP15.16■□□□□ 0.02
UBE2F-216ENST00000445676 Q6ZSR6 202 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 BEND5Q7L4P6 421 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 ATP6V0D2Q8N8Y2 350 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 GRAMD1AQ96CP6 724 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 BMFQ96LC9 184 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 FEM1AQ9BSK4 669 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 FAM117AQ9C073 453 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 OR51B4Q9Y5P0 310 aa15.16■□□□□ 0.02
UBE2F-216ENST00000445676 HEMK1Q9Y5R4 338 aaPredicted RBP15.16■□□□□ 0.02
UBE2F-216ENST00000445676 SPTAN1Q13813 2472 aaKnown RBP15.15■□□□□ 0.02
UBE2F-216ENST00000445676 EME2A4GXA9 379 aaPredicted RBP15.15■□□□□ 0.02
UBE2F-216ENST00000445676 POM121BA6NF01 834 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 KCNU1A8MYU2 1149 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 KPNA3O00505 521 aaPredicted RBP15.15■□□□□ 0.02
UBE2F-216ENST00000445676 SART1O43290 800 aaKnown RBP15.15■□□□□ 0.02
UBE2F-216ENST00000445676 NME1P15531 152 aaKnown RBP15.15■□□□□ 0.02
UBE2F-216ENST00000445676 OXCT1P55809 520 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 NFKB2Q00653 900 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 FGL2Q14314 439 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 RABGAP1LQ5R372 815 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 PERM1Q5SV97 790 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 C6orf132Q5T0Z8 1188 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 ATL3Q6DD88 541 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 FBXL22Q6P050 247 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 KYAT3Q6YP21 454 aaKnown RBP15.15■□□□□ 0.02
UBE2F-216ENST00000445676 SLC35C1Q96A29 364 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 CCNL2Q96S94 520 aaPredicted RBP15.15■□□□□ 0.02
UBE2F-216ENST00000445676 ST7Q9NRC1 585 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 KLF15Q9UIH9 416 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 RELNP78509 3460 aa15.15■□□□□ 0.02
UBE2F-216ENST00000445676 NBPF19A0A087WUL8 3843 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 RAD51BO15315 384 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 SLC16A3O15427 465 aaKnown RBP15.14■□□□□ 0.01
UBE2F-216ENST00000445676 TNFSF15O95150 251 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 PCDH8O95206 1070 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 MT-CO1P00395 513 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 CSF2P04141 144 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 SRCP12931 536 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 CHRNA3P32297 505 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 GPD2P43304 727 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 SYKP43405 635 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 PKP1Q13835 747 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 DEFB133Q30KQ1 61 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 COLEC12Q5KU26 742 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 TPRG1LQ5T0D9 272 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 ARL14Q8N4G2 192 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 CHST14Q8NCH0 376 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 OR2A12Q8NGT7 310 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 WDR36Q8NI36 951 aaKnown RBP15.14■□□□□ 0.01
UBE2F-216ENST00000445676 POPDC2Q9HBU9 364 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 STARD5Q9NSY2 213 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 VPS28Q9UK41 221 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 CFAP45Q9UL16 551 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 ATXN7L1Q9ULK2 861 aaPredicted RBP15.14■□□□□ 0.01
UBE2F-216ENST00000445676 HS3ST2Q9Y278 367 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 CSNK1G3Q9Y6M4 447 aa15.14■□□□□ 0.01
UBE2F-216ENST00000445676 TEX15Q9BXT5 2789 aa15.13■□□□□ 0.01
UBE2F-216ENST00000445676 SPTY2D1-AS1A0A0U1RR47 76 aa15.13■□□□□ 0.01
UBE2F-216ENST00000445676 K7ERQ8 282 aa15.13■□□□□ 0.01
UBE2F-216ENST00000445676 AQP9O43315 295 aa15.13■□□□□ 0.01
UBE2F-216ENST00000445676 TCEA3O75764 348 aa15.13■□□□□ 0.01
UBE2F-216ENST00000445676 ITGA2BP08514 1039 aa15.13■□□□□ 0.01
UBE2F-216ENST00000445676 GGCXP38435 758 aa15.13■□□□□ 0.01
UBE2F-216ENST00000445676 MLLT3P42568 568 aaPredicted RBP15.13■□□□□ 0.01
UBE2F-216ENST00000445676 NDUFA8P51970 172 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms