RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ZBED6P86452 979 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 EFHC2Q5JST6 749 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 KIAA0895LQ68EN5 471 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 DSG4Q86SJ6 1040 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 MINDY1Q8N5J2 469 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 ARFGAP1Q8N6T3 406 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 OR2A12Q8NGT7 310 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 OR14C36Q8NHC7 312 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 PIP4K2CQ8TBX8 421 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 SYN2Q92777 582 aaPredicted RBP15.09■□□□□ 0.01
USE1-202ENST00000445667 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.09■□□□□ 0.01
USE1-202ENST00000445667 ACE2Q9BYF1 805 aaPredicted RBP15.09■□□□□ 0.01
USE1-202ENST00000445667 ISCUQ9H1K1 167 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 TNKS2Q9H2K2 1166 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 TSPY26PQ9H489 355 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 TMEM248Q9NWD8 314 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 GPATCH2LQ9NWQ4 482 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 PPM1HQ9ULR3 514 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 FZD4Q9ULV1 537 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 LUC7L2Q9Y383 392 aaKnown RBP15.09■□□□□ 0.01
USE1-202ENST00000445667 DOCK4Q8N1I0 1966 aa15.09■□□□□ 0.01
USE1-202ENST00000445667 RNF103O00237 685 aa15.08■□□□□ 0
USE1-202ENST00000445667 GIPC1O14908 333 aa15.08■□□□□ 0
USE1-202ENST00000445667 ZNF821O75541 412 aaPredicted RBP15.08■□□□□ 0
USE1-202ENST00000445667 KCNK5O95279 499 aa15.08■□□□□ 0
USE1-202ENST00000445667 CD160O95971 181 aa15.08■□□□□ 0
USE1-202ENST00000445667 GYPCP04921 128 aa15.08■□□□□ 0
USE1-202ENST00000445667 SERPING1P05155 500 aa15.08■□□□□ 0
USE1-202ENST00000445667 IGHV4-34P06331 123 aa15.08■□□□□ 0
USE1-202ENST00000445667 CTSLP07711 333 aa15.08■□□□□ 0
USE1-202ENST00000445667 EPHB2P29323 1055 aa15.08■□□□□ 0
USE1-202ENST00000445667 CASP14P31944 242 aa15.08■□□□□ 0
USE1-202ENST00000445667 MAPKAPK2P49137 400 aa15.08■□□□□ 0
USE1-202ENST00000445667 ARF5P84085 180 aa15.08■□□□□ 0
USE1-202ENST00000445667 BNC1Q01954 994 aa15.08■□□□□ 0
USE1-202ENST00000445667 ZNF252P-AS1Q0IIN9 211 aa15.08■□□□□ 0
USE1-202ENST00000445667 GRIK2Q13002 908 aa15.08■□□□□ 0
USE1-202ENST00000445667 FAM46CQ5VWP2 391 aa15.08■□□□□ 0
USE1-202ENST00000445667 RETSATQ6NUM9 610 aa15.08■□□□□ 0
USE1-202ENST00000445667 C22orf39Q6P5X5 142 aa15.08■□□□□ 0
USE1-202ENST00000445667 CHST14Q8NCH0 376 aa15.08■□□□□ 0
USE1-202ENST00000445667 RNF214Q8ND24 703 aa15.08■□□□□ 0
USE1-202ENST00000445667 OR2T34Q8NGX1 318 aa15.08■□□□□ 0
USE1-202ENST00000445667 ARHGEF2Q92974 986 aaKnown RBP15.08■□□□□ 0
USE1-202ENST00000445667 EBF2Q9HAK2 575 aa15.08■□□□□ 0
USE1-202ENST00000445667 PCSK1NQ9UHG2 260 aa15.08■□□□□ 0
USE1-202ENST00000445667 FARP1Q9Y4F1 1045 aaPredicted RBP15.08■□□□□ 0
USE1-202ENST00000445667 BZW2Q9Y6E2 419 aaKnown RBP15.08■□□□□ 0
USE1-202ENST00000445667 PI4KAP42356 2102 aa15.08■□□□□ 0
USE1-202ENST00000445667 PCDH15Q96QU1 1955 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3DA0A087WVF3 549 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3IA0A087WXS9 549 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3EA0A087X179 549 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3KA0A087X1G2 549 aa15.07■□□□□ 0
USE1-202ENST00000445667 A0A1B0GVT2 93 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3FA6NER0 549 aaPredicted RBP15.07■□□□□ 0
USE1-202ENST00000445667 LRRC72A6NJI9 287 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3LB9A6J9 549 aa15.07■□□□□ 0
USE1-202ENST00000445667 C1QTNF3-AMACRE9PGA6 284 aa15.07■□□□□ 0
USE1-202ENST00000445667 ALOX15BO15296 676 aa15.07■□□□□ 0
USE1-202ENST00000445667 OPHN1O60890 802 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3HP0C7X1 549 aa15.07■□□□□ 0
USE1-202ENST00000445667 DESP17661 470 aa15.07■□□□□ 0
USE1-202ENST00000445667 CD27P26842 260 aa15.07■□□□□ 0
USE1-202ENST00000445667 CHRNA3P32297 505 aa15.07■□□□□ 0
USE1-202ENST00000445667 SERPINH1P50454 418 aaKnown RBP15.07■□□□□ 0
USE1-202ENST00000445667 DNA2P51530 1060 aa15.07■□□□□ 0
USE1-202ENST00000445667 CLCN6P51797 869 aa15.07■□□□□ 0
USE1-202ENST00000445667 ADPRHP54922 357 aa15.07■□□□□ 0
USE1-202ENST00000445667 SLC20A2Q08357 652 aa15.07■□□□□ 0
USE1-202ENST00000445667 CNTN1Q12860 1018 aa15.07■□□□□ 0
USE1-202ENST00000445667 POLD3Q15054 466 aaPredicted RBP15.07■□□□□ 0
USE1-202ENST00000445667 NFKBIBQ15653 356 aa15.07■□□□□ 0
USE1-202ENST00000445667 CA9Q16790 459 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3GQ6DHY5 549 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3CQ6IPX1 549 aa15.07■□□□□ 0
USE1-202ENST00000445667 PSAPL1Q6NUJ1 521 aa15.07■□□□□ 0
USE1-202ENST00000445667 LAYNQ6UX15 382 aa15.07■□□□□ 0
USE1-202ENST00000445667 LEKR1Q6ZMV7 388 aa15.07■□□□□ 0
USE1-202ENST00000445667 TBC1D3Q8IZP1 549 aaPredicted RBP15.07■□□□□ 0
USE1-202ENST00000445667 CCDC114Q96M63 670 aa15.07■□□□□ 0
USE1-202ENST00000445667 EPAS1Q99814 870 aa15.07■□□□□ 0
USE1-202ENST00000445667 ORAI3Q9BRQ5 295 aa15.07■□□□□ 0
USE1-202ENST00000445667 MAGEH1Q9H213 219 aa15.07■□□□□ 0
USE1-202ENST00000445667 RETREG1Q9H6L5 497 aa15.07■□□□□ 0
USE1-202ENST00000445667 NOL6Q9H6R4 1146 aaKnown RBP15.07■□□□□ 0
USE1-202ENST00000445667 TM9SF3Q9HD45 589 aa15.07■□□□□ 0
USE1-202ENST00000445667 FCF1Q9Y324 198 aaKnown RBP15.07■□□□□ 0
USE1-202ENST00000445667 NYNRINQ9P2P1 1898 aaKnown RBP15.06■□□□□ 0
USE1-202ENST00000445667 A0A087X0T9 212 aa15.06■□□□□ 0
USE1-202ENST00000445667 KPNA3O00505 521 aaPredicted RBP15.06■□□□□ 0
USE1-202ENST00000445667 RAMP2O60895 175 aa15.06■□□□□ 0
USE1-202ENST00000445667 FAM228BP0C875 321 aa15.06■□□□□ 0
USE1-202ENST00000445667 MYBL1P10243 752 aa15.06■□□□□ 0
USE1-202ENST00000445667 ETFBP38117 255 aa15.06■□□□□ 0
USE1-202ENST00000445667 NOVA1P51513 510 aaKnown RBP15.06■□□□□ 0
USE1-202ENST00000445667 AIF1P55008 147 aa15.06■□□□□ 0
USE1-202ENST00000445667 SEMA3BQ13214 749 aa15.06■□□□□ 0
USE1-202ENST00000445667 ARSIQ5FYB1 569 aa15.06■□□□□ 0
USE1-202ENST00000445667 ERMARDQ5T6L9 678 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms