RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 STX3Q13277 289 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 MAP3K21Q5TCX8 1036 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 RNF19BQ6ZMZ0 732 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 ZCWPW1Q9H0M4 648 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 CASS4Q9NQ75 786 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 ARHGEF38Q9NXL2 777 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 CABYRO75952 493 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 RPSAP08865 295 aaKnown RBP17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 HAPLN1P10915 354 aaPredicted RBP17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 CCNFP41002 786 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 MPP3Q13368 585 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 ITGA9Q13797 1035 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 FAM26DQ5JW98 314 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 KCTD11Q693B1 232 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 ESRP1Q6NXG1 681 aaKnown RBP17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 UTP4Q969X6 686 aaKnown RBP17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 MIEF2Q96C03 454 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 TACO1Q9BSH4 297 aaKnown RBP17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 OXCT2Q9BYC2 517 aaPredicted RBP17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 CATSPERBQ9H7T0 1116 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 ACTL7AQ9Y615 435 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 BUD23O43709 281 aaKnown RBP17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 EOMESO95936 686 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 IGLV3-25P01717 112 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 GCKP35557 465 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 MPP1Q00013 466 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 CDH17Q12864 832 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 SPANXN3Q5MJ09 141 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 SUGP1Q8IWZ8 645 aaKnown RBP17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 MYEOVQ96EZ4 313 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 HMCESQ96FZ2 354 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 TRHDEQ9UKU6 1024 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 ENO4A6NNW6 628 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 ENPP3O14638 875 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 NAA25Q14CX7 972 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 CNGA3Q16281 694 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 SWT1Q5T5J6 900 aaKnown RBP17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 RASIP1Q5U651 963 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 ATG16L1Q676U5 607 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 LONP2Q86WA8 852 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 CRLF3Q8IUI8 442 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 SERPINB11Q96P15 392 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 RPRD1AQ96P16 312 aaPredicted RBP17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 TBL1YQ9BQ87 522 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 OSBPL2Q9H1P3 480 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 DNAJC16Q9Y2G8 782 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 A0A096LPK6 155 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 H0Y3Z8 333 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 ADAM12O43184 909 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 RPLP2P05387 115 aaKnown RBP17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 TEDDM1Q5T9Z0 273 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 NAPEPLDQ6IQ20 393 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 RFWD3Q6PCD5 774 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 GLOD4Q9HC38 313 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 CDY1Q9Y6F8 540 aa17.1■□□□□ 0.33
LAPTM4B-201ENST00000445593 CFAP73A6NFT4 308 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 MOXD2PA6NHM9 499 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 ARVCFO00192 962 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 FCHO1O14526 889 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 OAZ2O95190 189 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 ALDH2P05091 517 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 ENO1P06733 434 aaKnown RBP17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 SELPP16109 830 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 YWHAQP27348 245 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 SLC10A7Q0GE19 358 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 NFE2Q16621 373 aaPredicted RBP17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 VWA5B1Q5TIE3 1220 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 AP1ARQ63HQ0 302 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 ZNF280DQ6N043 979 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 ATG14Q6ZNE5 492 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 MON1AQ86VX9 555 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 IGSF8Q969P0 613 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 PSMG2Q969U7 264 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 NACA2Q9H009 215 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 ARHGEF3Q9NR81 526 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 CDH23Q9H251 3354 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 KCNU1A8MYU2 1149 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 MTSS1O43312 755 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 MGRN1O60291 552 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 PLIN3O60664 434 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 ELF1P32519 619 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 KCNQ1P51787 676 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 COG7P83436 770 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 KDSRQ06136 332 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 GRM3Q14832 879 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 GPNMBQ14956 572 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 BRMS1LQ5PSV4 323 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 NAT9Q9BTE0 207 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 TBC1D10AQ9BXI6 508 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 MARCH2Q9P0N8 246 aa17.09■□□□□ 0.33
LAPTM4B-201ENST00000445593 ARHGEF37A1IGU5 675 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 SLC4A1P02730 911 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 PRKCGP05129 697 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 PIRTP0C851 137 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 CCR10P46092 362 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 MS4A13Q5J8X5 152 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 ASRGL1Q7L266 308 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 LDB1Q86U70 411 aaPredicted RBP17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 TMEM135Q86UB9 458 aa17.08■□□□□ 0.33
LAPTM4B-201ENST00000445593 AGAP11Q8TF27 550 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms