RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 OMDQ99983 421 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
SF3A1-203ENST00000444440 CAAP1Q9H8G2 361 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 SEPT11Q9NVA2 429 aaKnown RBP11.14□□□□□ -0.63
SF3A1-203ENST00000444440 FZD4Q9ULV1 537 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 NCKAP1Q9Y2A7 1128 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 BTBD3Q9Y2F9 522 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 ANKRD6Q9Y2G4 727 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 CEP295Q9C0D2 2601 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 CACNA1BQ00975 2339 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 EPG5Q9HCE0 2579 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 MCF2LO15068 1137 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 ATMINO43313 823 aaPredicted RBP11.13□□□□□ -0.63
SF3A1-203ENST00000444440 HYAL3O43820 417 aaPredicted RBP11.13□□□□□ -0.63
SF3A1-203ENST00000444440 RNASEH1O60930 286 aaKnown RBP11.13□□□□□ -0.63
SF3A1-203ENST00000444440 ADH1BP00325 375 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 KRT3P12035 628 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 OR1E1P30953 314 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 SDC4P31431 198 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 ADRA1BP35368 520 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 CTSKP43235 329 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 NSFP46459 744 aaKnown RBP11.13□□□□□ -0.63
SF3A1-203ENST00000444440 GRIA4P48058 902 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 ZNF165P49910 485 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 AFF3P51826 1226 aaKnown RBP11.13□□□□□ -0.63
SF3A1-203ENST00000444440 OXCT1P55809 520 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 TPM4P67936 248 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 SIM1P81133 766 aaPredicted RBP11.13□□□□□ -0.63
SF3A1-203ENST00000444440 IL9RQ01113 521 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 MTA1Q13330 715 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 FILIP1LQ4L180 1135 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 PRAMEF14Q5SWL7 426 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 LRRC31Q6UY01 552 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 STRADAQ7RTN6 431 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 NAXDQ8IW45 347 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 ATP11CQ8NB49 1132 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 C3orf20Q8ND61 904 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 OR2T34Q8NGX1 318 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 BAHD1Q8TBE0 780 aaPredicted RBP11.13□□□□□ -0.63
SF3A1-203ENST00000444440 OR8D1Q8WZ84 308 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 ZDHHC5Q9C0B5 715 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 ZYG11BQ9C0D3 744 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 TTYH3Q9C0H2 523 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 TNKS2Q9H2K2 1166 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 OSGEPQ9NPF4 335 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 TM7SF3Q9NS93 570 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 ARHGAP20Q9P2F6 1191 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 OR12D3Q9UGF7 316 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 PPM1HQ9ULR3 514 aa11.13□□□□□ -0.63
SF3A1-203ENST00000444440 COL27A1Q8IZC6 1860 aaPredicted RBP11.12□□□□□ -0.63
SF3A1-203ENST00000444440 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 A0A1W2PR77 199 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 ILVBLA1L0T0 632 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 SYCE3A1L190 88 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 LRRC53A6NM62 1247 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 SIGLEC16A6NMB1 481 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 C1QTNF9BB2RNN3 333 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 H0Y8X5 98 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 CBX4O00257 560 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 LATO43561 262 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 PLRG1O43660 514 aaKnown RBP11.12□□□□□ -0.63
SF3A1-203ENST00000444440 LRIG2O94898 1065 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 C1QTNF9P0C862 333 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 GPD1P21695 349 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 NNMTP40261 264 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 NRG1Q02297 640 aaPredicted RBP11.12□□□□□ -0.63
SF3A1-203ENST00000444440 GNA12Q03113 381 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 SLC14A1Q13336 389 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 SHBQ15464 509 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 PIP5KL1Q5T9C9 394 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 ACAD10Q6JQN1 1059 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 C22orf39Q6P5X5 142 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 DBX2Q6ZNG2 339 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 MCOLN2Q8IZK6 566 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 NETO2Q8NC67 525 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 MCEEQ96PE7 176 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 C2orf49Q9BVC5 232 aaPredicted RBP11.12□□□□□ -0.63
SF3A1-203ENST00000444440 SELENOOQ9BVL4 669 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 SCNM1Q9BWG6 230 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 ACE2Q9BYF1 805 aaPredicted RBP11.12□□□□□ -0.63
SF3A1-203ENST00000444440 TRIM7Q9C029 511 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 KLC2Q9H0B6 622 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 SLC32A1Q9H598 525 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 NOL6Q9H6R4 1146 aaKnown RBP11.12□□□□□ -0.63
SF3A1-203ENST00000444440 ATP13A1Q9HD20 1204 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 PPARGC1AQ9UBK2 798 aaKnown RBP11.12□□□□□ -0.63
SF3A1-203ENST00000444440 DNAI1Q9UI46 699 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 PCOLCE2Q9UKZ9 415 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 CA5BQ9Y2D0 317 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 FCF1Q9Y324 198 aaKnown RBP11.12□□□□□ -0.63
SF3A1-203ENST00000444440 PAXBP1Q9Y5B6 917 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 WASF2Q9Y6W5 498 aa11.12□□□□□ -0.63
SF3A1-203ENST00000444440 LRRC72A6NJI9 287 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 TMCO5BA8MYB1 307 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 ALOX15BO15296 676 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 CER1O95813 267 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 CALB1P05937 261 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 PLEKP08567 350 aaPredicted RBP11.11□□□□□ -0.63
SF3A1-203ENST00000444440 ZNF883P0CG24 379 aa11.11□□□□□ -0.63
SF3A1-203ENST00000444440 FERP16591 822 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms