RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 TMC7Q7Z402 723 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 PSTKQ8IV42 348 aaKnown RBP19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 GALNT15Q8N3T1 639 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 SPON1Q9HCB6 807 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 DDX43Q9NXZ2 648 aaKnown RBP19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 SF3B1O75533 1304 aaKnown RBP eCLIP19.29■□□□□ 0.681e-10■■■■■ 241.2
PAXBP1-204ENST00000443785 SHROOM3Q8TF72 1996 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 H3BNX3 289 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 MSI1O43347 362 aaKnown RBP19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 PTPN1P18031 435 aaKnown RBP19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 TFEBP19484 476 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 SERPINB8P50452 374 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 FAM187BQ17R55 369 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 LIN52Q52LA3 116 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 CPNE1Q99829 537 aa19.29■□□□□ 0.68
PAXBP1-204ENST00000443785 IL1BP01584 269 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 GRK2P25098 689 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 GABRB3P28472 473 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 TAF6P49848 677 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 LIMK2P53671 638 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 CNGA3Q16281 694 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 PPP1R3AQ16821 1122 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 NOTUMQ6P988 496 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 FSTL5Q8N475 847 aaPredicted RBP19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ACTRT2Q8TDY3 377 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 WNT8BQ93098 351 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ILKAPQ9H0C8 392 aaPredicted RBP19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 UBAP1Q9NZ09 502 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 GIMAP2Q9UG22 337 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 OR12D3Q9UGF7 316 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 PCDHB12Q9Y5F1 795 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ANKRD12Q6UB98 2062 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 CLGNO14967 610 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 FKBP6O75344 327 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 AHSGP02765 367 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 NPR3P17342 541 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ART3Q13508 389 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 RBBP5Q15291 538 aaKnown RBP19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 DGKDQ16760 1214 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ZNF789Q5FWF6 425 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ARHGAP17Q68EM7 881 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 EPGNQ6UW88 154 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ZNF354CQ86Y25 554 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 RYBPQ8N488 228 aaPredicted RBP19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 FAM110BQ8TC76 370 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 FERMT1Q9BQL6 677 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 BRD8Q9H0E9 1235 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 PLEKHA5Q9HAU0 1116 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 NDFIP2Q9NV92 336 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 HEMK1Q9Y5R4 338 aaPredicted RBP19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 C15orf38-AP3S2A0A0A6YYH1 394 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 UQCRBP14927 111 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 CEACAM7Q14002 265 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 CSHL1Q14406 222 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 SEL1L3Q68CR1 1132 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ARPINQ7Z6K5 226 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ST13P4Q8IZP2 240 aaPredicted RBP19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 LINC01465Q8N7H1 131 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 EMID1Q96A84 441 aaPredicted RBP19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 ZNF419Q96HQ0 510 aaPredicted RBP19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 PRPF18Q99633 342 aaKnown RBP19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 CDY2AQ9Y6F7 541 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 CDY1Q9Y6F8 540 aa19.28■□□□□ 0.68
PAXBP1-204ENST00000443785 KCNU1A8MYU2 1149 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 LRIG2O94898 1065 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 MAXP61244 160 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 ROR2Q01974 943 aaKnown RBP19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 SH2D4BQ5SQS7 431 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 GRTP1Q5TC63 336 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 ANKRD13AQ8IZ07 590 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 PPTC7Q8NI37 304 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 SCAMP5Q8TAC9 235 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 DCUN1D1Q96GG9 259 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 RPL10LQ96L21 214 aaKnown RBP19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 SPATA16Q9BXB7 569 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 TNFRSF12AQ9NP84 129 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 MKS1Q9NXB0 559 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 CCDC167Q9P0B6 97 aa19.27■□□□□ 0.68
PAXBP1-204ENST00000443785 ASB14A6NK59 587 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 MFSD6LQ8IWD5 586 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 OR9I1Q8NGQ6 314 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 GRIN3AQ8TCU5 1115 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 ELMO2Q96JJ3 720 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 LRGUKQ96M69 825 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 DUSP16Q9BY84 665 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 ADAMTS10Q9H324 1103 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 CRTAC1Q9NQ79 661 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 RNF181Q9P0P0 153 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 PDP2Q9P2J9 529 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 SFMBT1Q9UHJ3 866 aa19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 UBQLN1Q9UMX0 589 aaKnown RBP19.27■□□□□ 0.67
PAXBP1-204ENST00000443785 CCNT2O60583 730 aaKnown RBP19.26■□□□□ 0.67
PAXBP1-204ENST00000443785 MMP3P08254 477 aa19.26■□□□□ 0.67
PAXBP1-204ENST00000443785 HARS2P49590 506 aaKnown RBP19.26■□□□□ 0.67
PAXBP1-204ENST00000443785 PGFP49763 221 aa19.26■□□□□ 0.67
PAXBP1-204ENST00000443785 CDK7P50613 346 aa19.26■□□□□ 0.67
PAXBP1-204ENST00000443785 FAM91A1Q658Y4 838 aa19.26■□□□□ 0.67
PAXBP1-204ENST00000443785 PGM2L1Q6PCE3 622 aa19.26■□□□□ 0.67
PAXBP1-204ENST00000443785 STRADAQ7RTN6 431 aa19.26■□□□□ 0.67
PAXBP1-204ENST00000443785 LILRA2Q8N149 483 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms