RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CPQQ9Y646 472 aa5.1□□□□□ -1.59
HERC1-201ENST00000443617 NAMPTP43490 491 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 NANOGP8Q6NSW7 305 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 NPNTQ6UXI9 565 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 EEPD1Q7L9B9 569 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 TXNRD3Q86VQ6 643 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 HDAC10Q969S8 669 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 GBA3Q9H227 469 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SYBUQ9NX95 663 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 MKS1Q9NXB0 559 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SUCOQ9UBS9 1254 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 SNX9Q9Y5X1 595 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SPATA31A5Q5VU36 1347 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SPATA31A7Q8IWB4 1347 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SLIT3O75094 1523 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 GDF11O95390 407 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ATP6V0D1P61421 351 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SLC12A1Q13621 1099 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ZNF394Q53GI3 561 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 FAM156AQ8NDB6 213 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ACSS2Q9NR19 701 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ANKEF1Q9NU02 776 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SMPD3Q9NY59 655 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 RBAKQ9NYW8 714 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 NUP214P35658 2090 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 GNGT2O14610 69 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 BCAS1O75363 584 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 PIGNO95427 931 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 AP3M2P53677 418 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 GNG2P59768 71 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 GEN1Q17RS7 908 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 IGFN1Q86VF2 1251 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 RTFDC1Q9BY42 306 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 EPS8L2Q9H6S3 715 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 MARCH7Q9H992 704 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 C3orf70A6NLC5 250 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 CES4AQ5XG92 561 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 CLEC4FQ8N1N0 589 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ATP6V0D2Q8N8Y2 350 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 MRPL57Q9BQC6 102 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 SDCBP2Q9H190 292 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SIAEQ9HAT2 523 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ANAPC2Q9UJX6 822 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 FAM149AA5PLN7 773 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 GH2P01242 217 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 LRPAP1P30533 357 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 KPNA2P52292 529 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 NAGLUP54802 743 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 USP10Q14694 798 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 ANO4Q32M45 955 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 FAM102AQ5T9C2 384 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 TDRD10Q5VZ19 366 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 NAPRTQ6XQN6 538 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 IFNEQ86WN2 208 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 DCP2Q8IU60 420 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 TBC1D21Q8IYX1 336 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 NIPA2Q8N8Q9 360 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SLC10A4Q96EP9 437 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 TASP1Q9H6P5 420 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SLC38A10Q9HBR0 1119 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 NGRNQ9NPE2 291 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 SYNPO2Q9UMS6 1093 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 RUVBL2Q9Y230 463 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 KCNU1A8MYU2 1149 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 NR5A2O00482 541 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 CFHP08603 1231 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 IL1R2P27930 398 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ACOT2P49753 483 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 CRADDP78560 199 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 GABPAQ06546 454 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 TMEM179Q6ZVK1 233 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 PSD2Q9BQI7 771 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 OR2B2Q9GZK3 357 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 A0A096LPK6 155 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 CENPXA8MT69 81 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 CSH1P0DML2 217 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 CSH2P0DML3 217 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 PFKPQ01813 784 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 TOP3AQ13472 1001 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 TKFCQ3LXA3 575 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ITIH5Q86UX2 942 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 FBXL20Q96IG2 436 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ZFYVE19Q96K21 471 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SLC4A9Q96Q91 983 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 TBC1D14Q9P2M4 693 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 TNPO2O14787 897 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 TOP3BO95985 862 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 POLBP06746 335 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 GLDCP23378 1020 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ZNF143P52747 638 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 MYL6P60660 151 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 ZIK1Q3SY52 487 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 ZNF362Q5T0B9 420 aaPredicted RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 NEPROQ6NW34 567 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 DNAI2Q9GZS0 605 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 PCDHAC1Q9H158 963 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 PRSS51A0A1B0GVH4 220 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SHMT1P34896 483 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms