RNA–Protein interactions for RNA: ENST00000443239.7

DNMT3B-205, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-205ENST00000443239 NME3Q13232 169 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 USP10Q14694 798 aaKnown RBP13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 PLPPR4Q7Z2D5 763 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 CLEC14AQ86T13 490 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 NLGN2Q8NFZ4 835 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 GAB3Q8WWW8 586 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 C11orf84Q9BUA3 381 aaPredicted RBP13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 PCDHAC1Q9H158 963 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 ZBTB26Q9HCK0 441 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 MID2Q9UJV3 735 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 VPS28Q9UK41 221 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 COPG1Q9Y678 874 aaKnown RBP13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 PHIPQ8WWQ0 1821 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 ZCWPW2A0A1B0GU75 182 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 GRM3Q14832 879 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 CELF3Q5SZQ8 465 aaKnown RBP13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 ZYG11AQ6WRX3 759 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 DEFB106AQ8N104 65 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 SPATA6LQ8N4H0 392 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 TMEM102Q8N9M5 508 aaPredicted RBP13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 ISL2Q96A47 359 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 TMIGD2Q96BF3 282 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 COQ10BQ9H8M1 238 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 RSL24D1Q9UHA3 163 aaKnown RBP13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 AP4S1Q9Y587 144 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 NME7Q9Y5B8 376 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 HEMK1Q9Y5R4 338 aaPredicted RBP13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 SNX13Q9Y5W8 968 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 CEPT1Q9Y6K0 416 aa13.36□□□□□ -0.27
DNMT3B-205ENST00000443239 TMEM233B4DJY2 109 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 ACOT8O14734 319 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 EDNRBP24530 442 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 ADRM1Q16186 407 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 MGAT5BQ3V5L5 792 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 DLK2Q6UY11 383 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 TMEM135Q86UB9 458 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 PSTKQ8IV42 348 aaKnown RBP13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 MYO1HQ8N1T3 1032 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 CPSF7Q8N684 471 aaKnown RBP13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 AFG1LQ8WV93 481 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 KCTD4Q8WVF5 259 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 SNRNP27Q8WVK2 155 aaKnown RBP13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 LRTOMTQ8WZ04 291 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 TMEM79Q9BSE2 394 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 CXCL16Q9H2A7 254 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 UBP1Q9NZI7 540 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 CIDEBQ9UHD4 219 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 MGAMO43451 1857 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 KCNU1A8MYU2 1149 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 HBP1O60381 514 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 APOA4P06727 396 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 PITX1P78337 314 aaPredicted RBP13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 BST2Q10589 180 aaKnown RBP13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 PDAP1Q13442 181 aaKnown RBP13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 ANO4Q32M45 955 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 GK5Q6ZS86 529 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 LPCAT2Q7L5N7 544 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 TRIM74Q86UV6 250 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 TRIM73Q86UV7 250 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 PPWD1Q96BP3 646 aaKnown RBP13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 ZNF512Q96ME7 567 aaPredicted RBP13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 APBA2Q99767 749 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 OMDQ99983 421 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 SGIP1Q9BQI5 828 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 SMARCAD1Q9H4L7 1026 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 SUDS3Q9H7L9 328 aaPredicted RBP13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 VTI1BQ9UEU0 232 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 ZNF112Q9UJU3 913 aa13.35□□□□□ -0.27
DNMT3B-205ENST00000443239 TRIP11Q15643 1979 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 PTPRFP10586 1907 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 C7orf72A4D263 438 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 EEF2KO00418 725 aaKnown RBP13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 TRIM38O00635 465 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 TADA2AO75478 443 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 DDHD2O94830 711 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 HNRNPCP07910 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 CCDC166P0CW27 439 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 ZNF26P17031 533 aaPredicted RBP13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 DGKDQ16760 1214 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 GLRA4Q5JXX5 417 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 STRADAQ7RTN6 431 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 GRIN3AQ8TCU5 1115 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 SGF29Q96ES7 293 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 IGSF9Q9P2J2 1179 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 FAF1Q9UNN5 650 aaPredicted RBP13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 GINS2Q9Y248 185 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 RNF11Q9Y3C5 154 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 GMEB1Q9Y692 573 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 TCAF2A6NFQ2 919 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 SLCO1B7G3V0H7 640 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 SLC22A2O15244 555 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 MAGEB3O15480 346 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 CABYRO75952 493 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 AP2A1O95782 977 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 MATKP42679 507 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 BCAT1P54687 386 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 RALGDSQ12967 914 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 KIZQ2M2Z5 673 aa13.34□□□□□ -0.27
DNMT3B-205ENST00000443239 TREML2Q5T2D2 321 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms