RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TSGA10Q9BZW7 698 aa16.37■□□□□ 0.21
USP39-205ENST00000442708 MKRN2Q9H000 416 aaKnown RBP16.37■□□□□ 0.21
USP39-205ENST00000442708 POLMQ9NP87 494 aaPredicted RBP16.37■□□□□ 0.21
USP39-205ENST00000442708 DDX56Q9NY93 547 aaKnown RBP16.37■□□□□ 0.21
USP39-205ENST00000442708 PACSIN2Q9UNF0 486 aaPredicted RBP16.37■□□□□ 0.21
USP39-205ENST00000442708 CACNA1HO95180 2353 aa16.37■□□□□ 0.21
USP39-205ENST00000442708 DFFAO00273 331 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 KRT86O43790 486 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 NRDCO43847 1150 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 MFSD11O43934 449 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 SYNCRIPO60506 623 aaKnown RBP16.36■□□□□ 0.21
USP39-205ENST00000442708 CTNNA2P26232 953 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 CDKN2BP42772 138 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 SERPINH1P50454 418 aaKnown RBP16.36■□□□□ 0.21
USP39-205ENST00000442708 SLC10A2Q12908 348 aaPredicted RBP16.36■□□□□ 0.21
USP39-205ENST00000442708 SRSF5Q13243 272 aaKnown RBP16.36■□□□□ 0.21
USP39-205ENST00000442708 PAFAH1B3Q15102 231 aaKnown RBP16.36■□□□□ 0.21
USP39-205ENST00000442708 E2F5Q15329 346 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 LLGL1Q15334 1064 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 WDR5BQ86VZ2 330 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 KATNAL2Q8IYT4 538 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 ATP11CQ8NB49 1132 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 MRGPRX1Q96LB2 322 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 FAM129BQ96TA1 746 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 KCNH6Q9H252 994 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 PDFQ9HBH1 243 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 CD93Q9NPY3 652 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 EBF1Q9UH73 591 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 FCF1Q9Y324 198 aaKnown RBP16.36■□□□□ 0.21
USP39-205ENST00000442708 PCDHA3Q9Y5H8 950 aa16.36■□□□□ 0.21
USP39-205ENST00000442708 PLXND1Q9Y4D7 1925 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 VPS13AQ96RL7 3174 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 EDDM13A0A1B0GTR0 161 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 ARHGAP42A6NI28 874 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 ZNF487B1APH4 448 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 DDX3YO15523 660 aaKnown RBP16.35■□□□□ 0.21
USP39-205ENST00000442708 PRAMEF11O60813 436 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 MAP3K6O95382 1288 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 KRT10P13645 584 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 GBE1Q04446 702 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 ADCY2Q08462 1091 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 CCDC173Q0VFZ6 552 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 STARD3Q14849 445 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 IFI16Q16666 785 aaKnown RBP16.35■□□□□ 0.21
USP39-205ENST00000442708 ACCSLQ4AC99 568 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 RETSATQ6NUM9 610 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 C22orf39Q6P5X5 142 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 SPOCD1Q6ZMY3 1216 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 Q6ZVU0 165 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 VSIG1Q86XK7 387 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 ZNF354CQ86Y25 554 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 REXO1L1PQ8IX06 675 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 STK40Q8N2I9 435 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 LZTR1Q8N653 840 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 PLD5Q8N7P1 536 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 ZBTB44Q8NCP5 570 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 OR2T3Q8NH03 318 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 HERPUD2Q9BSE4 406 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 TNKS2Q9H2K2 1166 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 FAM86C1Q9NVL1 165 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 ZSCAN32Q9NX65 697 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 DONSONQ9NYP3 566 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 SUN2Q9UH99 717 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 PYCARDQ9ULZ3 195 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 HPCAL4Q9UM19 191 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 INVSQ9Y283 1065 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 R4GN57 208 aa16.35■□□□□ 0.21
USP39-205ENST00000442708 TARSL2A2RTX5 802 aaKnown RBP16.34■□□□□ 0.21
USP39-205ENST00000442708 RNF103O00237 685 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 AXIN1O15169 862 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 HRO43593 1189 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 NNMTP40261 264 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 SLC9A4Q6AI14 798 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 AADACL2Q6P093 401 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 NPNTQ6UXI9 565 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 PEX26Q7Z412 305 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 LONP2Q86WA8 852 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 CACUL1Q86Y37 369 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 TMPRSS6Q8IU80 811 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 RCOR2Q8IZ40 523 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 FRMD1Q8N878 549 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 LRRN4Q8WUT4 740 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 RLN3Q8WXF3 142 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 FAM126AQ9BYI3 521 aaPredicted RBP16.34■□□□□ 0.21
USP39-205ENST00000442708 BCCIPQ9P287 314 aaKnown RBP eCLIP16.34■□□□□ 0.21
USP39-205ENST00000442708 AMFRQ9UKV5 643 aa16.34■□□□□ 0.21
USP39-205ENST00000442708 hCG_1818297A0A087WSY0 165 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 CCDC163A0A0D9SF12 145 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 CXorf51AA0A1B0GTR3 108 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 CCDC66A2RUB6 948 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 MAFKO60675 156 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 LILRB5O75023 590 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 ALDH1A2O94788 518 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 TMCC1O94876 653 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 ZRANB2O95218 330 aaKnown RBP eCLIP16.33■□□□□ 0.2
USP39-205ENST00000442708 PEX11BO96011 259 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 C7P10643 843 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 CLCN6P51797 869 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 METAP1P53582 386 aa16.33■□□□□ 0.2
USP39-205ENST00000442708 PTPN5P54829 565 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms