RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 USP39Q53GS9 565 aaKnown RBP12.59□□□□□ -0.39
USP1-203ENST00000442679 ANKRD20A8PQ5CZ79 823 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 AFMIDQ63HM1 303 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 KIAA1324Q6UXG2 1013 aaKnown RBP12.59□□□□□ -0.39
USP1-203ENST00000442679 LEKR1Q6ZMV7 388 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 ARHGAP12Q8IWW6 846 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 NPWQ8N729 165 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 NETO2Q8NC67 525 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 PCDH19Q8TAB3 1148 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 KIAA1524Q8TCG1 905 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 GAB3Q8WWW8 586 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 PRCCQ92733 491 aaPredicted RBP12.59□□□□□ -0.39
USP1-203ENST00000442679 PTPRN2Q92932 1015 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 SIPA1Q96FS4 1042 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 ZNF670Q9BS34 389 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 FBRSQ9HAH7 460 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 INVSQ9Y283 1065 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 CACNA1IQ9P0X4 2223 aa12.59□□□□□ -0.39
USP1-203ENST00000442679 GRID2IPA4D2P6 1211 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 ZSCAN5CA6NGD5 496 aaPredicted RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 PSTPIP1O43586 416 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 BNIP3LO60238 219 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 RNASEH1O60930 286 aaKnown RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 RPP40O75818 363 aaKnown RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 CD160O95971 181 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 KRT1P04264 644 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 CCDC175P0C221 793 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 NBL1P41271 181 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 SERPINH1P50454 418 aaKnown RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 RPS14P62263 151 aaKnown RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 BYSLQ13895 437 aaKnown RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 Q6ZVU0 165 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 CEP68Q76N32 757 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 STK40Q8N2I9 435 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 RNF10Q8N5U6 811 aaKnown RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 RNF25Q96BH1 459 aaPredicted RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 PDLIM2Q96JY6 352 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 FAM129BQ96TA1 746 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 MAK16Q9BXY0 300 aaKnown RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 TSGA10Q9BZW7 698 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 CEP44Q9C0F1 390 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 RSPH9Q9H1X1 276 aaPredicted RBP12.58□□□□□ -0.4
USP1-203ENST00000442679 TNKS2Q9H2K2 1166 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 MYO15AQ9UKN7 3530 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 ACTL7AQ9Y615 435 aa12.58□□□□□ -0.4
USP1-203ENST00000442679 C3orf70A6NLC5 250 aaPredicted RBP12.57□□□□□ -0.4
USP1-203ENST00000442679 J3KR12 359 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 KRT86O43790 486 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 PRAMEF11O60813 436 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 ZNF217O75362 1048 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 PALMO75781 387 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 ACADMP11310 421 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 SERPINB6P35237 376 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 P2RY2P41231 377 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 DNA2P51530 1060 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 SIM2Q14190 667 aaPredicted RBP12.57□□□□□ -0.4
USP1-203ENST00000442679 ELAVL3Q14576 367 aaKnown RBP12.57□□□□□ -0.4
USP1-203ENST00000442679 MAP7D1Q3KQU3 841 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 ZNF776Q68DI1 518 aaPredicted RBP12.57□□□□□ -0.4
USP1-203ENST00000442679 C22orf39Q6P5X5 142 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 METTL3Q86U44 580 aaKnown RBP12.57□□□□□ -0.4
USP1-203ENST00000442679 CACUL1Q86Y37 369 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 TP53INP2Q8IXH6 220 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 KATNAL2Q8IYT4 538 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 PQLC3Q8N755 202 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 LRRC57Q8N9N7 239 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 RLN3Q8WXF3 142 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 OR8D1Q8WZ84 308 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 ISG20Q96AZ6 181 aaKnown RBP12.57□□□□□ -0.4
USP1-203ENST00000442679 FAF2Q96CS3 445 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 CCDC114Q96M63 670 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 ZNF830Q96NB3 372 aaPredicted RBP12.57□□□□□ -0.4
USP1-203ENST00000442679 RNF157Q96PX1 679 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 ITM2CQ9NQX7 267 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 GUCA1BQ9UMX6 200 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 CYP8B1Q9UNU6 501 aa12.57□□□□□ -0.4
USP1-203ENST00000442679 FCF1Q9Y324 198 aaKnown RBP12.57□□□□□ -0.4
USP1-203ENST00000442679 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
USP1-203ENST00000442679 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
USP1-203ENST00000442679 MUC22E2RYF6 1773 aaPredicted RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 DOCK4Q8N1I0 1966 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 MUC6Q6W4X9 2439 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 ZNF487B1APH4 448 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 MAP3K13O43283 966 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 ZNF821O75541 412 aaPredicted RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 ZRANB2O95218 330 aaKnown RBP eCLIP12.56□□□□□ -0.4
USP1-203ENST00000442679 IL1BP01584 269 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 DNTTP04053 509 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 RECQLP46063 649 aaPredicted RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 MARCKSL1P49006 195 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 ZBTB16Q05516 673 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 PAFAH1B3Q15102 231 aaKnown RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 CST6Q15828 149 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 INO80DQ53TQ3 878 aaPredicted RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 CARD16Q5EG05 197 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 NCBP2-AS2Q69YL0 99 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 MFSD7Q6UXD7 560 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 ARHGAP36Q6ZRI8 547 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 PRR23BQ6ZRT6 265 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 DSG4Q86SJ6 1040 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms