RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 VPS39Q96JC1 886 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 SLC39A3Q9BRY0 314 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 TMEM30AQ9NV96 361 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 MORF4L1Q9UBU8 362 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 SLC2A6Q9UGQ3 507 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 CPA4Q9UI42 421 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 USP3Q9Y6I4 520 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 DFFAO00273 331 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 TKTL1P51854 596 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 MPP3Q13368 585 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 ANKRD20A4Q4UJ75 823 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 SLC26A9Q7LBE3 791 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 LDB1Q86U70 411 aaPredicted RBP13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 DSELQ8IZU8 1212 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 SIX6OS1Q8N1H7 587 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 IPMKQ8NFU5 416 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 OR6J1Q8NGC5 347 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 GTF3C2Q8WUA4 911 aaPredicted RBP13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 LPPQ93052 612 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 RNF34Q969K3 372 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 DCUN1D1Q96GG9 259 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 OLFM3Q96PB7 478 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 ULBP1Q9BZM6 244 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 LIN28AQ9H9Z2 209 aaKnown RBP13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 IL1RL2Q9HB29 575 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 DDIT4Q9NX09 232 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 GTSE1Q9NYZ3 720 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 TRIP12Q14669 1992 aaPredicted RBP13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 DPYSL4O14531 572 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 FKBP6O75344 327 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 CTSHP09668 335 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 CD68P34810 354 aaPredicted RBP13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 BCAT1P54687 386 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 SEPT6Q14141 434 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 PCSK7Q16549 785 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 CMPK2Q5EBM0 449 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 NT5DC4Q86YG4 428 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 LILRA2Q8N149 483 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 RNF217Q8TC41 542 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 ACTRT2Q8TDY3 377 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 MPP4Q96JB8 637 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 RBBP8Q99708 897 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 MLPHQ9BV36 600 aaPredicted RBP13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 ACE2Q9BYF1 805 aaPredicted RBP13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 CHST12Q9NRB3 414 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 BFARQ9NZS9 450 aa13.36□□□□□ -0.27
SLC48A1-201ENST00000442218 GAS2O43903 313 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 VAPBO95292 243 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 GSTA2P09210 222 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 PTPN1P18031 435 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 MATKP42679 507 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 MAGEA6P43360 314 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 CHRNA4P43681 627 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 TPI1P60174 286 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 LAMC2Q13753 1193 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 CEACAM7Q14002 265 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 RBM44Q6ZP01 1051 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 ZBTB46Q86UZ6 589 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 RPL10LQ96L21 214 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 EPAS1Q99814 870 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 ZCWPW2A0A1B0GU75 182 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 CCNT2O60583 730 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 TRIM13O60858 407 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 PMPCBO75439 489 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 ALDH1A2O94788 518 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 IL1BP01584 269 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 GARSP41250 739 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 RANBP1P43487 201 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 CDKL1Q00532 357 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 LAMB3Q13751 1172 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 PPP1R3AQ16821 1122 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 OLFML2BQ68BL8 750 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 PGM2L1Q6PCE3 622 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 MFN1Q8IWA4 741 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 APPL2Q8NEU8 664 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 NXNL1Q96CM4 212 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 PHF21BQ96EK2 531 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 PKP2Q99959 881 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 FRMD8Q9BZ67 464 aaPredicted RBP13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 KATNBL1Q9H079 304 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 XPR1Q9UBH6 696 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 GIMAP2Q9UG22 337 aa13.35□□□□□ -0.27
SLC48A1-201ENST00000442218 SMIM28A0A1B0GU29 152 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 MMP3P08254 477 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 TFEBP19484 476 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 SPRP35270 261 aaPredicted RBP13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 FDFT1P37268 417 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 CACNB2Q08289 660 aaPredicted RBP13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 KIAA0319Q5VV43 1072 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 FAM91A1Q658Y4 838 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 EPGNQ6UW88 154 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 AMIGO2Q86SJ2 522 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 CEP97Q8IW35 865 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 LINC01465Q8N7H1 131 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 ATP6V1E2Q96A05 226 aa13.34□□□□□ -0.27
SLC48A1-201ENST00000442218 LRGUKQ96M69 825 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms