RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ILVBLA1L0T0 632 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 TLR4O00206 839 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 CALCAP01258 141 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 CYP11B1P15538 503 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 AKT2P31751 481 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 STAT1P42224 750 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 FAM102AQ5T9C2 384 aaPredicted RBP7.97□□□□□ -1.13
CD44-211ENST00000442151 SASS6Q6UVJ0 657 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 OLFML1Q6UWY5 402 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 SLC47A2Q86VL8 602 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 TRIM69Q86WT6 500 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 IRF2BP1Q8IU81 584 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 SH2D3CQ8N5H7 860 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 KLHDC7BQ96G42 594 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 LRIG1Q96JA1 1093 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 RPL10LQ96L21 214 aaKnown RBP7.97□□□□□ -1.13
CD44-211ENST00000442151 CAMK1GQ96NX5 476 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 FNDC3AQ9Y2H6 1198 aaKnown RBP7.97□□□□□ -1.13
CD44-211ENST00000442151 HS3ST4Q9Y661 456 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 PCDH15Q96QU1 1955 aa7.97□□□□□ -1.13
CD44-211ENST00000442151 H0Y8X5 98 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 ENC1O14682 589 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 PLRG1O43660 514 aaKnown RBP7.96□□□□□ -1.13
CD44-211ENST00000442151 GRAP2O75791 330 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 ERBB2P04626 1255 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 IGHV4-34P06331 123 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 ALPPL2P10696 532 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 UCHL3P15374 230 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 SPINK2P20155 84 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 CDK11BP21127 795 aaKnown RBP7.96□□□□□ -1.13
CD44-211ENST00000442151 OR1E1P30953 314 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 CHRNA3P32297 505 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 CTSOP43234 321 aaPredicted RBP7.96□□□□□ -1.13
CD44-211ENST00000442151 GSK3AP49840 483 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 ADPRHP54922 357 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 RAD51Q06609 339 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 TCP11X2Q5H9J9 407 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 MMS22LQ6ZRQ5 1243 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 CACTIN-AS1Q8N1I8 211 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 PCDH20Q8N6Y1 951 aaKnown RBP7.96□□□□□ -1.13
CD44-211ENST00000442151 DCAF4L2Q8NA75 395 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 PIP4K2CQ8TBX8 421 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 FRS2Q8WU20 508 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 NT5C3BQ969T7 300 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 IFT43Q96FT9 208 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 FEM1CQ96JP0 617 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 PCMTD1Q96MG8 357 aaPredicted RBP7.96□□□□□ -1.13
CD44-211ENST00000442151 ZYG11BQ9C0D3 744 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 ANO10Q9NW15 660 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 PPARGC1AQ9UBK2 798 aaKnown RBP7.96□□□□□ -1.13
CD44-211ENST00000442151 DKK4Q9UBT3 224 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 KLK13Q9UKR3 277 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 PPM1HQ9ULR3 514 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 HS3ST2Q9Y278 367 aa7.96□□□□□ -1.13
CD44-211ENST00000442151 ASCC3Q8N3C0 2202 aaKnown RBP7.96□□□□□ -1.13
CD44-211ENST00000442151 ADAMTS9Q9P2N4 1935 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 CNOT1A5YKK6 2376 aaKnown RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 NEMP2A6NFY4 417 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 ZSCAN5CA6NGD5 496 aaPredicted RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 SRRM3A6NNA2 597 aaPredicted RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 LATO43561 262 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 CALB1P05937 261 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 SDC4P31431 198 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 DUSP3P51452 185 aaPredicted RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 FAM193AP78312 1265 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 CDR2Q01850 454 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 BNC1Q01954 994 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 SCAPQ12770 1279 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 POLD3Q15054 466 aaPredicted RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 TAF5Q15542 800 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 PTPN20Q4JDL3 420 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 CXorf57Q6NSI4 855 aaKnown RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 BAHD1Q8TBE0 780 aaPredicted RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 CASKIN2Q8WXE0 1202 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 RAB7BQ96AH8 199 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 ARHGEF26Q96DR7 871 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 ALG14Q96F25 216 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 CNDP2Q96KP4 475 aaKnown RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 SLC6A18Q96N87 628 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 NCAPGQ9BPX3 1015 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 SPON2Q9BUD6 331 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 NAT10Q9H0A0 1025 aaKnown RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 IL21RQ9HBE5 538 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 SIX2Q9NPC8 291 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 NCKIPSDQ9NZQ3 722 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 IL36AQ9UHA7 158 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 XPO7Q9UIA9 1087 aaKnown RBP7.96□□□□□ -1.14
CD44-211ENST00000442151 HS3ST3A1Q9Y663 406 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 CHD8Q9HCK8 2581 aa7.96□□□□□ -1.14
CD44-211ENST00000442151 CACNA1GO43497 2377 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 ZFHX4Q86UP3 3567 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 GON4LQ3T8J9 2241 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 IGLV3-10A0A075B6K4 115 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 DKK1O94907 266 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 ENDOD1O94919 500 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 JUPP14923 745 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 MAPKAPK2P49137 400 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 STK19P49842 368 aaPredicted RBP7.95□□□□□ -1.14
CD44-211ENST00000442151 NXPH1P58417 271 aa7.95□□□□□ -1.14
CD44-211ENST00000442151 RPS21P63220 83 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms