RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 COL18A1P39060 1754 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 IGKV6D-41A0A0C4DH26 115 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 PRSS51A0A1B0GVH4 220 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 FAM25EA8MYX2 175 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 AURKAO14965 403 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 GARTP22102 1010 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 S100A1P23297 94 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 ELK4P28324 431 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 IDUAP35475 653 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 ARPC4P59998 168 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 MYL6P60660 151 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 SLC13A2Q13183 592 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 POLD3Q15054 466 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 IMPG1Q17R60 797 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 FAM214AQ32MH5 1076 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 CCDC153Q494R4 210 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 MTERF2Q49AM1 385 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 TBCELQ5QJ74 424 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 SEL1L3Q68CR1 1132 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 OR6B2Q6IFH4 312 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 TAS2R42Q7RTR8 314 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 OR9I1Q8NGQ6 314 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 ZBED2Q9BTP6 218 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 TARS2Q9BW92 718 aaKnown RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 GATA5Q9BWX5 397 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 NPLQ9BXD5 320 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 SLC2A11Q9BYW1 496 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 TASP1Q9H6P5 420 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 HESX1Q9UBX0 185 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 FETUBQ9UGM5 382 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 USP18Q9UMW8 372 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 MRPL42Q9Y6G3 142 aaKnown RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 ZNF541Q9H0D2 1346 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 IQCA1LA6NCM1 817 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 APOC4-APOC2K7ER74 178 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 KPNA4O00629 521 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 GSRP00390 522 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 APOC2P02655 101 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 HNRNPLP14866 589 aaKnown RBP eCLIP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 ACO1P21399 889 aaKnown RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 JAG1P78504 1218 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 GTF2BQ00403 316 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 OCA2Q04671 838 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 PRKCQQ04759 706 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 POU5F1BQ06416 359 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 NFATC3Q12968 1075 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 FAM47CQ5HY64 1035 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 UBE2UQ5VVX9 321 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 CDC42EP5Q6NZY7 148 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 CARM1Q86X55 608 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 SPPL2CQ8IUH8 684 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 LINC00116Q8NCU8 138 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 NLRP4Q96MN2 994 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 ADI1Q9BV57 179 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 OSBPL10Q9BXB5 764 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 ING2Q9H160 280 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 VTA1Q9NP79 307 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 ABCB10Q9NRK6 738 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 VPS45Q9NRW7 570 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 DDX28Q9NUL7 540 aaKnown RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 FAM49BQ9NUQ9 324 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 EXD2Q9NVH0 621 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 DCAF16Q9NXF7 216 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 PI4KBQ9UBF8 816 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 SEPT9Q9UHD8 586 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 ZNHIT2Q9UHR6 403 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 AGO2Q9UKV8 859 aaKnown RBP7.65□□□□□ -1.18
HDAC9-214ENST00000441542 SLC39A10Q9ULF5 831 aa7.65□□□□□ -1.18
HDAC9-214ENST00000441542 A8MV72 311 aaPredicted RBP7.65□□□□□ -1.19
HDAC9-214ENST00000441542 TAF4O00268 1085 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 BCAS2O75934 225 aaPredicted RBP7.65□□□□□ -1.19
HDAC9-214ENST00000441542 DDHD2O94830 711 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 DLGAP3O95886 979 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 ITGBL1O95965 494 aaPredicted RBP7.65□□□□□ -1.19
HDAC9-214ENST00000441542 ERBB2P04626 1255 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 ENO2P09104 434 aaPredicted RBP7.65□□□□□ -1.19
HDAC9-214ENST00000441542 ZNF16P17020 682 aaPredicted RBP7.65□□□□□ -1.19
HDAC9-214ENST00000441542 GABRB3P28472 473 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 SLC7A2P52569 658 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 PLK1P53350 603 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 ARPP19P56211 112 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 PHKG1Q16816 387 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 PLEKHG6Q3KR16 790 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 ARL13AQ5H913 290 aaPredicted RBP7.65□□□□□ -1.19
HDAC9-214ENST00000441542 PAGE2BQ5JRK9 111 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 DEPDC1Q5TB30 811 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 PPP2R2DQ66LE6 453 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 HMBOX1Q6NT76 420 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 ZCCHC8Q6NZY4 707 aaKnown RBP7.65□□□□□ -1.19
HDAC9-214ENST00000441542 TICAM1Q8IUC6 712 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 USP33Q8TEY7 942 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 CDKL2Q92772 493 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 ACDQ96AP0 544 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 PEBP4Q96S96 227 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 SEPHS2Q99611 448 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 IL12RB2Q99665 862 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 ADPGKQ9BRR6 497 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 STRA6Q9BX79 667 aa7.65□□□□□ -1.19
HDAC9-214ENST00000441542 MTMR12Q9C0I1 747 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms