RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CCNYQ8ND76 341 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 C2orf15Q8WU43 125 aaKnown RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 ATP2A3Q93084 1043 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 TSGA13Q96PP4 275 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 LGMNQ99538 433 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 OSBPL7Q9BZF2 842 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 TKTL2Q9H0I9 626 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 ZCWPW1Q9H0M4 648 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 KIF9Q9HAQ2 790 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 TXLNGQ9NUQ3 528 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 TMEM30AQ9NV96 361 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 OR12D3Q9UGF7 316 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 TIMM13Q9Y5L4 95 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-209ENST00000440653 USH1CQ9Y6N9 552 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 MIA3Q5JRA6 1907 aa9.34□□□□□ -0.91
HDAC6-209ENST00000440653 SOBPA7XYQ1 873 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 TRIM49D1C9J1S8 452 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 TNFRSF10BO14763 440 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 GLRA3O75311 464 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 LRIG2O94898 1065 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 RTN3O95197 1032 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 EPHB2P29323 1055 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 SCTRP47872 440 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 AFF1P51825 1210 aaKnown RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 CACNA2D1P54289 1103 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 CDK18Q07002 472 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 NIPAL4Q0D2K0 466 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 EIF4EBP2Q13542 120 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 IKBKEQ14164 716 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 ANO4Q32M45 955 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 CLLU1OSQ5K130 101 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 CWF19L1Q69YN2 538 aaKnown RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 CASC4Q6P4E1 433 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 TRAF7Q6Q0C0 670 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 CCDC91Q7Z6B0 441 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 ADGRD2Q7Z7M1 963 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 COLGALT2Q8IYK4 626 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 TCP10LQ8TDR4 215 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 PTCD2Q8WV60 388 aaKnown RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 LINC01599Q8WXQ3 324 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 FATE1Q969F0 183 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 RNF34Q969K3 372 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 CDK5RAP1Q96SZ6 601 aaKnown RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 KCNK16Q96T55 309 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 PAIP2Q9BPZ3 127 aaKnown RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 PAAF1Q9BRP4 392 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 SIKE1Q9BRV8 207 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 TMEM175Q9BSA9 504 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 IL22Q9GZX6 179 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 MLXIPLQ9NP71 852 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 TBC1D13Q9NVG8 400 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 MOCS1Q9NZB8 636 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 BFARQ9NZS9 450 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 SEPT10Q9P0V9 454 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 TXNDC16Q9P2K2 825 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 CACNG4Q9UBN1 327 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 PHTF1Q9UMS5 762 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 SCML2Q9UQR0 700 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 PCDHB5Q9Y5E4 795 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 CAPN7Q9Y6W3 813 aa9.33□□□□□ -0.92
HDAC6-209ENST00000440653 NYNRINQ9P2P1 1898 aaKnown RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 MYO18AQ92614 2054 aaKnown RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 ASH1LQ9NR48 2969 aaKnown RBP9.33□□□□□ -0.92
HDAC6-209ENST00000440653 MAST4O15021 2626 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 A0A1W2PPM1 405 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 MAGEB16A2A368 324 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CARNS1A5YM72 827 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 WASH4PA8MWX3 477 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 H7C4K7 107 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 I3L4J1 428 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 BIRC5O15392 142 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 AVILO75366 819 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 ANXA9O76027 345 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 USP1O94782 785 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 TGDSO95455 350 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 GLP2RO95838 553 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CSH1P0DML2 217 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CSH2P0DML3 217 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CCNCP24863 283 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 ADRA1DP25100 572 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 FOXN2P32314 431 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 GRIK1P39086 918 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 GP5P40197 560 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 HADHAP40939 763 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 ETV4P43268 484 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 NPY2RP49146 381 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CLCN5P51795 746 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CSE1LP55060 971 aaKnown RBP9.32□□□□□ -0.92
HDAC6-209ENST00000440653 MGAT5Q09328 741 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CDH17Q12864 832 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CAMK1Q14012 370 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 SLC1A5Q15758 541 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 PAN2Q504Q3 1202 aaKnown RBP9.32□□□□□ -0.92
HDAC6-209ENST00000440653 SLC39A12Q504Y0 691 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 ATG16L1Q676U5 607 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 KYAT3Q6YP21 454 aaKnown RBP9.32□□□□□ -0.92
HDAC6-209ENST00000440653 LCA5Q86VQ0 697 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 MON1AQ86VX9 555 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 RASSF3Q86WH2 238 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 NUP93Q8N1F7 819 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms