RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 PAK5Q9P286 719 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 KLHL8Q9P2G9 620 aaPredicted RBP21.12■□□□□ 0.97
CHD3-204ENST00000439235 ASIC3Q9UHC3 531 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 VPS51Q9UID3 782 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 TRHDEQ9UKU6 1024 aa21.12■□□□□ 0.97
CHD3-204ENST00000439235 UTP11Q9Y3A2 253 aaKnown RBP21.12■□□□□ 0.97
CHD3-204ENST00000439235 BRWD1Q9NSI6 2320 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 GCATO75600 419 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 HEXIM1O94992 359 aaKnown RBP21.11■□□□□ 0.97
CHD3-204ENST00000439235 PFKPQ01813 784 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 WASHC5Q12768 1159 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 MARC1Q5VT66 337 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 ITPRIPL1Q6GPH6 555 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 METTL3Q86U44 580 aaKnown RBP21.11■□□□□ 0.97
CHD3-204ENST00000439235 CASKIN2Q8WXE0 1202 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 EXOC4Q96A65 974 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 IL12RB2Q99665 862 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 TRIM51Q9BSJ1 452 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 INTS6Q9UL03 887 aaKnown RBP21.11■□□□□ 0.97
CHD3-204ENST00000439235 NEU2Q9Y3R4 380 aa21.11■□□□□ 0.97
CHD3-204ENST00000439235 NYNRINQ9P2P1 1898 aaKnown RBP21.1■□□□□ 0.97
CHD3-204ENST00000439235 SNAP91O60641 907 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 ZMPSTE24O75844 475 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 PEX11BO96011 259 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 JCHAINP01591 159 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 ASGR2P07307 311 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 RHOXF2BP0C7M4 288 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 POLR2EP19388 210 aaKnown RBP21.1■□□□□ 0.97
CHD3-204ENST00000439235 GLDCP23378 1020 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 OPRD1P41143 372 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 MRPS25P82663 173 aaKnown RBP21.1■□□□□ 0.97
CHD3-204ENST00000439235 ARF5P84085 180 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 ZBTB17Q13105 803 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 TDGQ13569 410 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 LBRQ14739 615 aaKnown RBP21.1■□□□□ 0.97
CHD3-204ENST00000439235 TRIP13Q15645 432 aaPredicted RBP21.1■□□□□ 0.97
CHD3-204ENST00000439235 TEX44Q53QW1 395 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 ANKRD20A2Q5SQ80 823 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 ANKRD20A1Q5TYW2 823 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 ANKRD20A3Q5VUR7 823 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 ARHGEF18Q6ZSZ5 1173 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 SUGP1Q8IWZ8 645 aaKnown RBP21.1■□□□□ 0.97
CHD3-204ENST00000439235 RHOXF2Q9BQY4 288 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 SLC25A13Q9UJS0 675 aa21.1■□□□□ 0.97
CHD3-204ENST00000439235 ASLP04424 464 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 SRFP11831 508 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 RPL22P35268 128 aaKnown RBP21.09■□□□□ 0.97
CHD3-204ENST00000439235 MMP13P45452 471 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 SLC6A11P48066 632 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 NUMBP49757 651 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 ZP2Q05996 745 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 KDSRQ06136 332 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 SLC20A2Q08357 652 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 ZNF235Q14590 738 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 EIF4HQ15056 248 aaKnown RBP21.09■□□□□ 0.97
CHD3-204ENST00000439235 GEN1Q17RS7 908 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 INO80DQ53TQ3 878 aaPredicted RBP21.09■□□□□ 0.97
CHD3-204ENST00000439235 MBLAC2Q68D91 279 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 NUDT18Q6ZVK8 323 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 PID1Q7Z2X4 250 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 ZNF567Q8N184 647 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 TEX26Q8N6G2 289 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 GLIS1Q8NBF1 620 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 CCDC110Q8TBZ0 833 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 USP33Q8TEY7 942 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 LRRC45Q96CN5 670 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 PNKPQ96T60 521 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 ERP44Q9BS26 406 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 CINPQ9BW66 212 aaPredicted RBP21.09■□□□□ 0.97
CHD3-204ENST00000439235 C8orf33Q9H7E9 229 aaPredicted RBP21.09■□□□□ 0.97
CHD3-204ENST00000439235 RBM22Q9NW64 420 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHD3-204ENST00000439235 SEPT3Q9UH03 358 aa21.09■□□□□ 0.97
CHD3-204ENST00000439235 TARSL2A2RTX5 802 aaKnown RBP21.08■□□□□ 0.97
CHD3-204ENST00000439235 NDC80O14777 642 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 ATP5BP06576 529 aaKnown RBP21.08■□□□□ 0.97
CHD3-204ENST00000439235 ZSCAN5DPP0CG00 497 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 ETS1P14921 441 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 HSPA9P38646 679 aaKnown RBP21.08■□□□□ 0.97
CHD3-204ENST00000439235 VPS41P49754 854 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 NRLP54845 237 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 SLC7A5Q01650 507 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 SLC10A7Q0GE19 358 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 GPS1Q13098 491 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 LEKR1Q6ZMV7 388 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 ADIPOR2Q86V24 386 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 PHTF2Q8N3S3 785 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 TERB1Q8NA31 727 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 MYRIPQ8NFW9 859 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 RUBCNQ92622 972 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 TTC17Q96AE7 1141 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 MSANTD3Q96H12 275 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 TEKT5Q96M29 485 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 AGAP3Q96P47 875 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 CEP41Q9BYV8 373 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 CIPCQ9C0C6 399 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 SLC2A4RGQ9NR83 387 aa21.08■□□□□ 0.97
CHD3-204ENST00000439235 REV3LO60673 3130 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 CHD5Q8TDI0 1954 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.07■□□□□ 0.96
CHD3-204ENST00000439235 SPECC1L-ADORA2AF8WAN1 911 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms