RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 MFSD7Q6UXD7 560 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 CENPLQ8N0S6 344 aaPredicted RBP12.27□□□□□ -0.44
NEK1-201ENST00000439128 RIBC1Q8N443 379 aaPredicted RBP12.27□□□□□ -0.44
NEK1-201ENST00000439128 MYCBPAPQ8TBZ2 947 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 SETD7Q8WTS6 366 aaKnown RBP12.27□□□□□ -0.44
NEK1-201ENST00000439128 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 PPP1R14AQ96A00 147 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 RERGLQ9H628 205 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 MRGBPQ9NV56 204 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 OPTCQ9UBM4 332 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 LOC100653049A0A140TA62 436 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 INPPL1O15357 1258 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 SEC22BO75396 215 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 KRT34O76011 436 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 PGM1P36871 562 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 GNA13Q14344 377 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 ATP6AP1LQ52LC2 224 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 AGMOQ6ZNB7 445 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 USP6NLQ92738 828 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 WRAP53Q9BUR4 548 aaKnown RBP12.27□□□□□ -0.45
NEK1-201ENST00000439128 TNKS2Q9H2K2 1166 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 ETNK1Q9HBU6 452 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 TMCC3Q9ULS5 477 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 SIGLEC16A6NMB1 481 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 QSOX1O00391 747 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 ERN1O75460 977 aaKnown RBP12.27□□□□□ -0.45
NEK1-201ENST00000439128 KLHL2O95198 593 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 TCF3P15923 654 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 NTSP30990 170 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 LRRC32Q14392 662 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 CBX2Q14781 532 aaPredicted RBP12.27□□□□□ -0.45
NEK1-201ENST00000439128 KLHL23Q8NBE8 558 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 BTN2A3PQ96KV6 586 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 CDHR5Q9HBB8 845 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 IL1RAPL1Q9NZN1 696 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 OR10H1Q9Y4A9 318 aa12.27□□□□□ -0.45
NEK1-201ENST00000439128 MAFBQ9Y5Q3 323 aaPredicted RBP12.27□□□□□ -0.45
NEK1-201ENST00000439128 UMPSP11172 480 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ZNF143P52747 638 aaPredicted RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 CDK20Q8IZL9 346 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 SGSM3Q96HU1 749 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 NIFKQ9BYG3 293 aaKnown RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 PRRG4Q9BZD6 226 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 H0Y858 1186 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 PPP1R11O60927 126 aaPredicted RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 OR6A2O95222 327 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 MYBL2P10244 700 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 KCNA5P22460 613 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 PSMB4P28070 264 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 IL2P60568 153 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 NPNTQ6UXI9 565 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 FAM151BQ6UXP7 276 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 LUZP2Q86TE4 346 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 GPSM1Q86YR5 675 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 GALNT13Q8IUC8 556 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 QRFPRQ96P65 431 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ARHGAP9Q9BRR9 750 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 SNRNP25Q9BV90 132 aaKnown RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 TRIT1Q9H3H1 467 aaKnown RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 CAAP1Q9H8G2 361 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ATG13O75143 517 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 IFNA14P01570 189 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 CYP3A5P20815 502 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 SERPINB4P48594 390 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 MBTD1Q05BQ5 628 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 GRB14Q14449 540 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 SLC29A2Q14542 456 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ANKS1BQ7Z6G8 1248 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 HSD17B14Q9BPX1 270 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 AGXT2Q9BYV1 514 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 MAF1Q9H063 256 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 NKX2-4Q9H2Z4 354 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 EVLQ9UI08 416 aaPredicted RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 MT-CO1P00395 513 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 MPOP05164 745 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ILF3Q12906 894 aaKnown RBP eCLIP12.26□□□□□ -0.45
NEK1-201ENST00000439128 AFTPHQ6ULP2 937 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ROPN1BQ9BZX4 212 aaPredicted RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 DPY30Q9C005 99 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 C10orf88Q9H8K7 445 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ROPN1Q9HAT0 212 aaPredicted RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 ZDHHC4Q9NPG8 344 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 PRKAG3Q9UGI9 489 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 PCDHA3Q9Y5H8 950 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ABCC6O95255 1503 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 CHURC1-FNTBB4DL54 471 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ANXA6P08133 673 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 NFKB1P19838 968 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 GRTP1Q5TC63 336 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 NT5DC1Q5TFE4 455 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 LYPLAL1Q5VWZ2 237 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 COMMD2Q86X83 199 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 RAVER1Q8IY67 606 aaKnown RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 GLIS3Q8NEA6 775 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 RUBCNQ92622 972 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 REXO5Q96IC2 774 aaKnown RBP12.26□□□□□ -0.45
NEK1-201ENST00000439128 KLHL5Q96PQ7 755 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ABCG8Q9H221 673 aa12.26□□□□□ -0.45
NEK1-201ENST00000439128 ACP6Q9NPH0 428 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms