RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 FAM126AQ9BYI3 521 aaPredicted RBP17.28■□□□□ 0.36
TARDBP-203ENST00000439080 SLC39A8Q9C0K1 460 aa17.28■□□□□ 0.36
TARDBP-203ENST00000439080 RAPGEFL1Q9UHV5 662 aa17.28■□□□□ 0.36
TARDBP-203ENST00000439080 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
TARDBP-203ENST00000439080 CACNA1HO95180 2353 aa17.27■□□□□ 0.36
TARDBP-203ENST00000439080 ARHGAP42A6NI28 874 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 ZNF487B1APH4 448 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 K7ERQ8 282 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 DFFAO00273 331 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 SIN3BO75182 1162 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 VAV1P15498 845 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 GABRG2P18507 467 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 NDUFV2P19404 249 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 CLCN6P51797 869 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 COPAP53621 1224 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 NRLP54845 237 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 GEMIN4P57678 1058 aaKnown RBP17.27■□□□□ 0.35
TARDBP-203ENST00000439080 ACCSLQ4AC99 568 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 C22orf39Q6P5X5 142 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 NT5DC3Q86UY8 548 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 LONP2Q86WA8 852 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 TP53INP2Q8IXH6 220 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 FRS2Q8WU20 508 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 RNF25Q96BH1 459 aaPredicted RBP17.27■□□□□ 0.35
TARDBP-203ENST00000439080 TPSD1Q9BZJ3 242 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 SLC6A17Q9H1V8 727 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 PRSS16Q9NQE7 514 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 ZSCAN32Q9NX65 697 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 EBF1Q9UH73 591 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 SUN2Q9UH99 717 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 ACTL7AQ9Y615 435 aa17.27■□□□□ 0.35
TARDBP-203ENST00000439080 ANKRD36A6QL64 1941 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 CXorf51AA0A1B0GTR3 108 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 ZSCAN5CA6NGD5 496 aaPredicted RBP17.26■□□□□ 0.35
TARDBP-203ENST00000439080 AXIN1O15169 862 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 SMAD6O43541 496 aaKnown RBP17.26■□□□□ 0.35
TARDBP-203ENST00000439080 FTCDO95954 541 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 CD160O95971 181 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 CTNNA2P26232 953 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 PAPOLAP51003 745 aaKnown RBP17.26■□□□□ 0.35
TARDBP-203ENST00000439080 DLG2Q15700 870 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 MFSD7Q6UXD7 560 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 LEKR1Q6ZMV7 388 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 Q6ZVU0 165 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 PEX26Q7Z412 305 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 WDR5BQ86VZ2 330 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 PGBD3Q8N328 593 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 PQLC3Q8N755 202 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 OR2T3Q8NH03 318 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 MRGPRX1Q96LB2 322 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 RNF157Q96PX1 679 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 MKRN2Q9H000 416 aaKnown RBP17.26■□□□□ 0.35
TARDBP-203ENST00000439080 FBRSQ9HAH7 460 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 PDFQ9HBH1 243 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 AMFRQ9UKV5 643 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 FCF1Q9Y324 198 aaKnown RBP17.26■□□□□ 0.35
TARDBP-203ENST00000439080 PCDHGA2Q9Y5H1 932 aa17.26■□□□□ 0.35
TARDBP-203ENST00000439080 CEP192Q8TEP8 1941 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 CCDC163A0A0D9SF12 145 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 TARSL2A2RTX5 802 aaKnown RBP17.25■□□□□ 0.35
TARDBP-203ENST00000439080 CCDC66A2RUB6 948 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 ZBTB24O43167 697 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-203ENST00000439080 PAFAH1B3Q15102 231 aaKnown RBP17.25■□□□□ 0.35
TARDBP-203ENST00000439080 C9orf64Q5T6V5 341 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 KIAA1324Q6UXG2 1013 aaKnown RBP17.25■□□□□ 0.35
TARDBP-203ENST00000439080 ARHGAP36Q6ZRI8 547 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 CCDC50Q8IVM0 306 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 ATPAF2Q8N5M1 289 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 ZBTB44Q8NCP5 570 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-203ENST00000439080 PTPRN2Q92932 1015 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 RBM41Q96IZ5 413 aaKnown RBP17.25■□□□□ 0.35
TARDBP-203ENST00000439080 CEP44Q9C0F1 390 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 SP110Q9HB58 689 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 PACSIN2Q9UNF0 486 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-203ENST00000439080 PCDHA3Q9Y5H8 950 aa17.25■□□□□ 0.35
TARDBP-203ENST00000439080 SPAG17Q6Q759 2223 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 J3KR12 359 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 BNIP3LO60238 219 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 PRAMEF11O60813 436 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 CDKN2BP42772 138 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 SLC20A2Q08357 652 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 ELAVL3Q14576 367 aaKnown RBP17.24■□□□□ 0.35
TARDBP-203ENST00000439080 SLC9A4Q6AI14 798 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 ZC3H14Q6PJT7 736 aaKnown RBP17.24■□□□□ 0.35
TARDBP-203ENST00000439080 SPOCD1Q6ZMY3 1216 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 RFX6Q8HWS3 928 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 TMPRSS6Q8IU80 811 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 EXD1Q8NHP7 514 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 ATOH1Q92858 354 aaPredicted RBP17.24■□□□□ 0.35
TARDBP-203ENST00000439080 ALS2CR12Q96Q35 445 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 IRF2BPLQ9H1B7 796 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 TNKS2Q9H2K2 1166 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 PRDM16Q9HAZ2 1276 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 FAM86C1Q9NVL1 165 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 UBA2Q9UBT2 640 aaPredicted RBP17.24■□□□□ 0.35
TARDBP-203ENST00000439080 R4GN57 208 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 FRYLO94915 3013 aa17.24■□□□□ 0.35
TARDBP-203ENST00000439080 APOL1O14791 398 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 ZNF821O75541 412 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms