RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SLC8A3P57103 927 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 NR0B2Q15466 257 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 SKOR2Q2VWA4 1001 aaPredicted RBP11.49□□□□□ -0.57
CSTF3-203ENST00000438862 PITRM1Q5JRX3 1037 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 PPP1R26Q5T8A7 1209 aaPredicted RBP11.49□□□□□ -0.57
CSTF3-203ENST00000438862 RFWD3Q6PCD5 774 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 EPM2AIP1Q7L775 607 aaPredicted RBP11.49□□□□□ -0.57
CSTF3-203ENST00000438862 RAB11FIP2Q7L804 512 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 JAMLQ86YT9 394 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 C12orf56Q8IXR9 622 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 ELOA2Q8IYF1 753 aaPredicted RBP11.49□□□□□ -0.57
CSTF3-203ENST00000438862 IQUBQ8NA54 791 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 HJURPQ8NCD3 748 aaPredicted RBP11.49□□□□□ -0.57
CSTF3-203ENST00000438862 OR13H1Q8NG92 308 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 HPS1Q92902 700 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 NAT6Q93015 286 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 CCDC34Q96HJ3 373 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 TIGD1Q96MW7 591 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 TWNKQ96RR1 684 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 DDX50Q9BQ39 737 aaKnown RBP11.49□□□□□ -0.57
CSTF3-203ENST00000438862 USB1Q9BQ65 265 aaKnown RBP11.49□□□□□ -0.57
CSTF3-203ENST00000438862 FUCA2Q9BTY2 467 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 LRRC27Q9C0I9 530 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 STRADBQ9C0K7 418 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 CYP3A43Q9HB55 503 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 STIM2Q9P246 746 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 SFMBT1Q9UHJ3 866 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 SRPK3Q9UPE1 567 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 PCDHB11Q9Y5F2 797 aa11.49□□□□□ -0.57
CSTF3-203ENST00000438862 SPTBN1Q01082 2364 aaKnown RBP11.49□□□□□ -0.57
CSTF3-203ENST00000438862 RP1P56715 2156 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 ICE1Q9Y2F5 2266 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 NBASA2RRP1 2371 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 LRRIQ3A6PVS8 624 aaPredicted RBP11.48□□□□□ -0.57
CSTF3-203ENST00000438862 EXOC3O60645 756 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 CSF2P04141 144 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 HNRNPA2B1P22626 353 aaKnown RBP11.48□□□□□ -0.57
CSTF3-203ENST00000438862 STAT6P42226 847 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 CTSOP43234 321 aaPredicted RBP11.48□□□□□ -0.57
CSTF3-203ENST00000438862 TKTL1P51854 596 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 CCDC15Q0P6D6 951 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 CNTN1Q12860 1018 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 SRSF6Q13247 344 aaKnown RBP11.48□□□□□ -0.57
CSTF3-203ENST00000438862 AGBL4Q5VU57 503 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 NUGGCQ68CJ6 796 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 BORAQ6PGQ7 559 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 ABI3BPQ7Z7G0 1075 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 PIGZQ86VD9 579 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 CARNMT1Q8N4J0 409 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 ZNF548Q8NEK5 533 aaPredicted RBP11.48□□□□□ -0.57
CSTF3-203ENST00000438862 SPATA20Q8TB22 786 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 OR8D1Q8WZ84 308 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 RPL10LQ96L21 214 aaKnown RBP11.48□□□□□ -0.57
CSTF3-203ENST00000438862 IL12RB2Q99665 862 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 MAGEF1Q9HAY2 307 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 ABCC13Q9NSE7 274 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 HS3ST3A1Q9Y663 406 aa11.48□□□□□ -0.57
CSTF3-203ENST00000438862 ITPR2Q14571 2701 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 DOPEY1Q5JWR5 2465 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 GOLGA6L7A0A1B0GV03 622 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 C1QTNF3-AMACRE9PGA6 284 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 NTN3O00634 580 aaPredicted RBP11.47□□□□□ -0.57
CSTF3-203ENST00000438862 AQP9O43315 295 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 ACSL4O60488 711 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 KRT38O76015 456 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 NME1P15531 152 aaKnown RBP11.47□□□□□ -0.57
CSTF3-203ENST00000438862 PFKFB1P16118 471 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 SLC6A4P31645 630 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 SYKP43405 635 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 PDX1P52945 283 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 CYP4F2P78329 520 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 SULT2A1Q06520 285 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 KCNAB2Q13303 367 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 CDH18Q13634 790 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 ZACNQ401N2 412 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 FAM133BQ5BKY9 247 aaKnown RBP11.47□□□□□ -0.57
CSTF3-203ENST00000438862 ZNF542PQ5EBM4 170 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 PERM1Q5SV97 790 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 BSPRYQ5W0U4 402 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 HIST2H2BCQ6DN03 193 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 CRTC1Q6UUV9 634 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 Q6ZSR6 202 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 ATCAYQ86WG3 371 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 SLC22A18ASQ8N1D0 253 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 PLEKHO2Q8TD55 490 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 HEXIM2Q96MH2 286 aaKnown RBP11.47□□□□□ -0.57
CSTF3-203ENST00000438862 MYOCQ99972 504 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 CCDC3Q9BQI4 270 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 SARDHQ9UL12 918 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 PPM1HQ9ULR3 514 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 CACNA1DQ01668 2161 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 LRRK1Q38SD2 2015 aa11.47□□□□□ -0.57
CSTF3-203ENST00000438862 A0A1B0GVL5 298 aa11.46□□□□□ -0.57
CSTF3-203ENST00000438862 A0A1W2PQU0 124 aa11.46□□□□□ -0.57
CSTF3-203ENST00000438862 A6NNZ2 444 aa11.46□□□□□ -0.57
CSTF3-203ENST00000438862 MUSKO15146 869 aa11.46□□□□□ -0.57
CSTF3-203ENST00000438862 ALOX15BO15296 676 aa11.46□□□□□ -0.57
CSTF3-203ENST00000438862 GADD45BO75293 160 aaPredicted RBP11.46□□□□□ -0.57
CSTF3-203ENST00000438862 IGLV3-27P01718 113 aa11.46□□□□□ -0.57
CSTF3-203ENST00000438862 MYL1P05976 194 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms