RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ARHGEF7Q14155 803 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 AGAP9Q5VTM2 703 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 DENND1CQ8IV53 801 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 CCDC134Q9H6E4 229 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 DTLQ9NZJ0 730 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 UBA2Q9UBT2 640 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 A0A096LPK6 155 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 MBLAC1A4D2B0 266 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 APOA4P06727 396 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 RALBP11234 206 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 CKBP12277 381 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 CD151P48509 253 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 SLC25A11Q02978 314 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 PABPC1LQ4VXU2 614 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 C7orf61Q8IZ16 206 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 GLIS1Q8NBF1 620 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 CDC26Q8NHZ8 85 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 IRGQQ8WZA9 623 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 CERS2Q96G23 380 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 DCUN1D1Q96GG9 259 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 HERPUD2Q9BSE4 406 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 PRKD2Q9BZL6 878 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 POLR1EQ9GZS1 481 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 EML4Q9HC35 981 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 DYRK4Q9NR20 520 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 SEPT3Q9UH03 358 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 ACTL7BQ9Y614 415 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 A0A1W2PPM1 405 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 HEATR9A2RTY3 570 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CRTAMO95727 393 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 L1CAMP32004 1257 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CUL3Q13618 768 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 LPIN1Q14693 890 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 SIX1Q15475 284 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 TRIP10Q15642 601 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 DPYSL2Q16555 572 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 FNBP1LQ5T0N5 605 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 PDPK2PQ6A1A2 396 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 HFE2Q6ZVN8 426 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 NPAS4Q8IUM7 802 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 LPCAT1Q8NF37 534 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 APBB2Q92870 758 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 B3GALT6Q96L58 329 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CDK5RAP2Q96SN8 1893 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 SLC9A7Q96T83 725 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 GPAMQ9HCL2 828 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 GLP2RO95838 553 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 LRPAP1P30533 357 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CD86P42081 329 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CSHL1Q14406 222 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 EFTUD2Q15029 972 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 TEX44Q53QW1 395 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 MARCH8Q5T0T0 291 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 GRTP1Q5TC63 336 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 C16orf46Q6P387 395 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 UNC5AQ6ZN44 842 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 AGMOQ6ZNB7 445 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 TRABD2AQ86V40 505 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 MAB21L3Q8N8X9 362 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 SMG8Q8ND04 991 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CKAP2Q8WWK9 683 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 ZNF75CPQ92670 426 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 USP13Q92995 863 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 ADGRE3Q9BY15 652 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 TRIM54Q9BYV2 358 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 ILKAPQ9H0C8 392 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CYP4F12Q9HCS2 524 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 ARMCX1Q9P291 453 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CYTH4Q9UIA0 394 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CRLS1Q9UJA2 301 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 SYN3O14994 580 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 SOAT2O75908 522 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 TSHRP16473 764 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 RPL17P18621 184 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 KCNA4P22459 653 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 ABL2P42684 1182 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 TLE2Q04725 743 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 ITGA9Q13797 1035 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 EML3Q32P44 896 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 TNFAIP8L3Q5GJ75 292 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 THEMIS2Q5TEJ8 643 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 RNF168Q8IYW5 571 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 SLCO2A1Q92959 643 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 UTP4Q969X6 686 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 CPNE1Q99829 537 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 SLCO1B3Q9NPD5 702 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 PIGVQ9NUD9 493 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 MOSPD1Q9UJG1 213 aa11.76□□□□□ -0.53
TRAPPC9-202ENST00000438773 SUPT3HB4E1H0 165 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 BUD23O43709 281 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 SRP72O76094 671 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 HNRNPCP07910 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 FOXN2P32314 431 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 SMAD3P84022 425 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 KLHL5Q96PQ7 755 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 Q9H521 79 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 SUDS3Q9H7L9 328 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 SLC28A3Q9HAS3 691 aa11.75□□□□□ -0.53
TRAPPC9-202ENST00000438773 ARHGEF3Q9NR81 526 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms