RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 UGDHO60701 494 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 NDUFB8O95169 186 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 CRYABP02511 175 aaKnown RBP3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 ALPLP05186 524 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 CYP3A4P08684 503 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 DHRS4L1P0CG22 281 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 CYP3A7P24462 503 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 ALDH7A1P49419 539 aaKnown RBP3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 THBS3P49746 956 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 RGS19P49795 217 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 SLC37A1P57057 533 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 FOXL2P58012 376 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 FOXO1Q12778 655 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 SF3A3Q12874 501 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 CUL4BQ13620 913 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 ANXA2RQ3ZCQ2 193 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 KIAA1755Q5JYT7 1200 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 ZNF569Q5MCW4 686 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 ANKRD45Q5TZF3 282 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 ASPHD1Q5U4P2 390 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 LIPMQ5VYY2 423 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 DHRS13Q6UX07 377 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 CRELD2Q6UXH1 353 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 SLC39A5Q6ZMH5 540 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 TRABD2AQ86V40 505 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 ADGRF4Q8IZF3 695 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 PAQR4Q8N4S7 273 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 SRFBP1Q8NEF9 429 aaKnown RBP3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 AFG1LQ8WV93 481 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 GOLGA1Q92805 767 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 CLMNQ96JQ2 1002 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAR2Q96K12 515 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 LYZL4Q96KX0 146 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 WDR83Q9BRX9 315 aaKnown RBP3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 TRIM2Q9C040 744 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM234AQ9H0X4 552 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 PRDM8Q9NQV8 689 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 THSD1Q9NS62 852 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 DECR2Q9NUI1 292 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 KIF17Q9P2E2 1029 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 CNTN6Q9UQ52 1028 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 GPR52Q9Y2T5 361 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 DGKBQ9Y6T7 804 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 KIAA1107Q9UPP5 1409 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 RREB1Q92766 1687 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 ADCY9O60503 1353 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 PIK3R4Q99570 1358 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM90A18PA6NE21 464 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM90A16PA6NEW6 464 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM90A9PA6NNJ1 464 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM90A5PA8MXJ8 464 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 B9A039 149 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 H0Y3Z8 333 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 H3BNX3 289 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 CNTN5O94779 1100 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM90A15PP0C7V4 464 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM90A14PP0C7W9 464 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 RXRAP19793 462 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 TGM2P21980 687 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBXAS1P24557 533 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 CCKBRP32239 447 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 CTCFP49711 727 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 POLE2P56282 527 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM3BP58499 235 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 NANOS2P60321 138 aaKnown RBP3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 TLE3Q04726 772 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 PDCLQ13371 301 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 IDI1Q13907 227 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 CBFBQ13951 182 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 DLGAP5Q15398 846 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 SMTNL2Q2TAL5 461 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 TRIM60Q495X7 471 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 ISM2Q6H9L7 571 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 TANGO2Q6ICL3 276 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 WDR93Q6P2C0 686 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 NFRKBQ6P4R8 1299 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 RAB11FIP2Q7L804 512 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 SYT13Q7L8C5 426 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 MOGAT3Q86VF5 341 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 FTSJ3Q8IY81 847 aaKnown RBP3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 ADGRF3Q8IZF5 1079 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 RSC1A1Q92681 617 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 SFXN1Q9H9B4 322 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 PRDM16Q9HAZ2 1276 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 TXNRD2Q9NNW7 524 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 KCND3Q9UK17 655 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 COG5Q9UP83 839 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 SLC12A4Q9UP95 1085 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 ZBTB1Q9Y2K1 713 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 SQORQ9Y6N5 450 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 TMEM131LA2VDJ0 1609 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 PIK3C2BO00750 1634 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 COL22A1Q8NFW1 1626 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 NOS1P29475 1434 aa3.68□□□□□ -1.82
HMGB3P12-201ENST00000438745 PRXQ9BXM0 1461 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 KIAA1210Q9ULL0 1709 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 ADGRB3O60242 1522 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3DA0A087WVF3 549 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3IA0A087WXS9 549 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3EA0A087X179 549 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms