RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PTPN3P26045 913 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 CRHR1P34998 444 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 GPR15P49685 360 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 ARPP19P56211 112 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 NFE2Q16621 373 aaPredicted RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 ZNF280DQ6N043 979 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 PACS1Q6VY07 963 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 FAM43BQ6ZT52 329 aaPredicted RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 TAC4Q86UU9 113 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 FBXO27Q8NI29 283 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 CDKL2Q92772 493 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 PGAP3Q96FM1 320 aaPredicted RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 SLC9A7Q96T83 725 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 EIF2B3Q9NR50 452 aaKnown RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 RRN3Q9NYV6 651 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 STOML1Q9UBI4 398 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 MTO1Q9Y2Z2 717 aaKnown RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 MRPL42Q9Y6G3 142 aaKnown RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 RPS6KL1Q9Y6S9 549 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 MKI67P46013 3256 aaKnown RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 KLF11O14901 512 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 MRPL58Q14197 206 aaKnown RBP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 DDR2Q16832 855 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 MARK2Q7KZI7 788 aaKnown RBP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 RASSF3Q86WH2 238 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 LRRC43Q8N309 656 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 GALNT15Q8N3T1 639 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 TTC9BQ8N6N2 239 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 BCL7CQ8WUZ0 217 aaPredicted RBP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 IFT43Q96FT9 208 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 FUBP3Q96I24 572 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 APOL2Q9BQE5 337 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 GORASP1Q9BQQ3 440 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 BTBD10Q9BSF8 475 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 NMUR2Q9GZQ4 415 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 TMEM39AQ9NV64 488 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 TAS2R1Q9NYW7 299 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 SIRPGQ9P1W8 387 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 FBXW11Q9UKB1 542 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 GYG2O15488 501 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 UBTFL6P0CB48 400 aaPredicted RBP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 PGFP49763 221 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 ROR2Q01974 943 aaKnown RBP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 SEMA3BQ13214 749 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 TEX44Q53QW1 395 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 RTP2Q5QGT7 225 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 C1orf53Q5VUE5 145 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 ARMC3Q5W041 872 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 ATG16L1Q676U5 607 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 LRRC74BQ6ZQY2 392 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 ATAD1Q8NBU5 361 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 DQX1Q8TE96 717 aaKnown RBP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 NTAN1Q96AB6 310 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 PTCD3Q96EY7 689 aaKnown RBP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 TMEM175Q9BSA9 504 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 TKTL2Q9H0I9 626 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 SAR1AQ9NR31 198 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 MKS1Q9NXB0 559 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 CPSF2Q9P2I0 782 aaKnown RBP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 LNPEPQ9UIQ6 1025 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 PCDHB5Q9Y5E4 795 aa14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 KIAA0100Q14667 2235 aaKnown RBP14.15□□□□□ -0.14
PTCHD3-201ENST00000438700 OR6C75A6NL08 312 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 ZBTB24O43167 697 aaPredicted RBP14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 F9P00740 461 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 BPGMP07738 259 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 ZCCHC18P0CG32 403 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 PDE1BQ01064 536 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 SCAPQ12770 1279 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 PDE1CQ14123 709 aaPredicted RBP14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 PPM1JQ5JR12 505 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 DNAAF3Q8N9W5 541 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 CELF6Q96J87 481 aaKnown RBP14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 WDCPQ9H6R7 721 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 UBP1Q9NZI7 540 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 IGSF9Q9P2J2 1179 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 TXNDC16Q9P2K2 825 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 OR12D3Q9UGF7 316 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 FCHO1O14526 889 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 PSMG1O95456 288 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 POLBP06746 335 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 ITGA2BP08514 1039 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 CPB1P15086 417 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 KCNA4P22459 653 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 CXCR3P49682 368 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 AIF1P55008 147 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 RPL10AP62906 217 aaKnown RBP14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 OCRLQ01968 901 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 ZBTB17Q13105 803 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 THOC5Q13769 683 aaKnown RBP14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 IKBKEQ14164 716 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 HSF5Q4G112 596 aaPredicted RBP14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 N4BP2L1Q5TBK1 243 aaPredicted RBP14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 IRGCQ6NXR0 463 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 TAS1R1Q7RTX1 841 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 PPP1R14CQ8TAE6 165 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 RNF34Q969K3 372 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 VWCEQ96DN2 955 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 C7orf26Q96N11 449 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms