RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ITGB1P05556 798 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RHOXF2BP0C7M4 288 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CTAGE8P0CG41 777 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 TPBGLP0DKB5 382 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 MYBL1P10243 752 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RARGP13631 454 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PRG2P13727 222 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RDXP35241 583 aaKnown RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PGM1P36871 562 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 MCAMP43121 646 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 MAGEA8P43361 318 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CARSP49589 748 aaKnown RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RGS3P49796 1198 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 NPY4RP50391 375 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 GBX2P52951 348 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 BCAT1P54687 386 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CASP9P55211 416 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 SESN2P58004 480 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CTAG1AP78358 180 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 KRT17Q04695 432 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PPATQ06203 517 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PPP3CAQ08209 521 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 MGAT5Q09328 741 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 LMAN2Q12907 356 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PTP4A2Q12974 167 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CHIT1Q13231 466 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 SNX1Q13596 522 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RCN2Q14257 317 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 FRG1Q14331 258 aaKnown RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 NEDD9Q14511 834 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 TMEM132BQ14DG7 1078 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PCLAFQ15004 111 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 ARHGEF6Q15052 776 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PDK1Q15118 436 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 STK11Q15831 433 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 INAQ16352 499 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 SLC39A12Q504Y0 691 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RAB41Q5JT25 222 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 C9orf152Q5JTZ5 239 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 AADACL4Q5VUY2 407 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 ANO7Q6IWH7 933 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 KRT80Q6KB66 452 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 OLFML1Q6UWY5 402 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PACS1Q6VY07 963 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 KIAA0408Q6ZU52 694 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PTCHD4Q6ZW05 846 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 MIGA2Q7L4E1 593 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 BHLHA9Q7RTU4 235 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 DSG4Q86SJ6 1040 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CTAGE6Q86UF2 777 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PRIMA1Q86XR5 153 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CTAGE4Q8IX94 777 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CDH26Q8IXH8 852 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 SYCP3Q8IZU3 236 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CNTROBQ8N137 903 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 SFRP1Q8N474 314 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 FRMD1Q8N878 549 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RASSF8Q8NHQ8 419 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 HASPINQ8TF76 798 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 NTN5Q8WTR8 489 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 KBTBD7Q8WVZ9 684 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 KCNE4Q8WWG9 221 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RAB7BQ96AH8 199 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 DTNBP1Q96EV8 351 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 MAML3Q96JK9 1138 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 FAM111AQ96PZ2 611 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 CTAGE1Q96RT6 745 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 SH3GL2Q99962 352 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RHOXF2Q9BQY4 288 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 NAA11Q9BSU3 229 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 C1orf43Q9BWL3 253 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PHF7Q9BWX1 381 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PACSIN1Q9BY11 444 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 MTMR12Q9C0I1 747 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 STMN4Q9H169 189 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 ABCG8Q9H221 673 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 TAOK3Q9H2K8 898 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 DPH5Q9H2P9 285 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 IL1RAPL2Q9NP60 686 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 IL23AQ9NPF7 189 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 TBC1D23Q9NUY8 699 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 FBXO40Q9UH90 709 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 SCOCQ9UIL1 159 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 AJAP1Q9UKB5 411 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RIMKLBQ9ULI2 386 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 FZD1Q9UP38 647 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 ATP11BQ9Y2G3 1177 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 RPH3AQ9Y2J0 694 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 VWA7Q9Y334 891 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 PAXBP1Q9Y5B6 917 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 TRPV2Q9Y5S1 764 aa3.78□□□□□ -1.8
HMGB1P12-201ENST00000438594 SPATA31A6Q5VVP1 1343 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CENPJQ9HC77 1338 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 GRID2IPA4D2P6 1211 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 C2orf78A6NCI8 922 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 GLOD5A6NK44 160 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 LIPT2A6NK58 231 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 KPNA7A9QM74 516 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 DAB1O75553 588 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCNDBP1O95273 360 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms