RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 RAB6CQ9H0N0 254 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 HS3ST2Q9Y278 367 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 BPTFQ12830 3046 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 ALOX15BO15296 676 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 RNGTTO60942 597 aaKnown RBP18.61■□□□□ 0.57
GTF3A-204ENST00000438571 PRKCSHP14314 528 aaPredicted RBP18.61■□□□□ 0.57
GTF3A-204ENST00000438571 CYP11B1P15538 503 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 ZNF18P17022 549 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 CDH5P33151 784 aaPredicted RBP18.61■□□□□ 0.57
GTF3A-204ENST00000438571 RXRGP48443 463 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 ARRB1P49407 418 aaPredicted RBP18.61■□□□□ 0.57
GTF3A-204ENST00000438571 DEUP1Q05D60 604 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 TPD52L1Q16890 204 aaPredicted RBP18.61■□□□□ 0.57
GTF3A-204ENST00000438571 SOWAHCQ53LP3 525 aaPredicted RBP18.61■□□□□ 0.57
GTF3A-204ENST00000438571 SLC45A4Q5BKX6 768 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 BRMS1LQ5PSV4 323 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 FAM102AQ5T9C2 384 aaPredicted RBP18.61■□□□□ 0.57
GTF3A-204ENST00000438571 FAM46CQ5VWP2 391 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 XYLT1Q86Y38 959 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 ATP11CQ8NB49 1132 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 NT5C3BQ969T7 300 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 TNKS2Q9H2K2 1166 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 KDM4CQ9H3R0 1056 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 NDST4Q9H3R1 872 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 WDCPQ9H6R7 721 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 PCDHGA1Q9Y5H4 931 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 ACTL7AQ9Y615 435 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 IGSF10Q6WRI0 2623 aa18.61■□□□□ 0.57
GTF3A-204ENST00000438571 FASNP49327 2511 aaKnown RBP18.61■□□□□ 0.57
GTF3A-204ENST00000438571 ASXL3Q9C0F0 2248 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 GOLGA8SH3BPF8 625 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 KPNA3O00505 521 aaPredicted RBP18.6■□□□□ 0.57
GTF3A-204ENST00000438571 YKT6O15498 198 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 CHRNA3P32297 505 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 KIF26BQ2KJY2 2108 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 VWA3BQ502W6 1294 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 HES3Q5TGS1 186 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 C22orf39Q6P5X5 142 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 NOP9Q86U38 636 aaKnown RBP18.6■□□□□ 0.57
GTF3A-204ENST00000438571 TMPRSS12Q86WS5 348 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 PDCD7Q8N8D1 485 aaKnown RBP18.6■□□□□ 0.57
GTF3A-204ENST00000438571 MLKLQ8NB16 471 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 PGAP3Q96FM1 320 aaPredicted RBP18.6■□□□□ 0.57
GTF3A-204ENST00000438571 LRIG1Q96JA1 1093 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 BBC3Q96PG8 261 aaPredicted RBP18.6■□□□□ 0.57
GTF3A-204ENST00000438571 TUBGCP2Q9BSJ2 902 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 ERVMER34-1Q9H9K5 563 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 ZNF212Q9UDV6 495 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 TPX2Q9ULW0 747 aaKnown RBP18.6■□□□□ 0.57
GTF3A-204ENST00000438571 STAP1Q9ULZ2 295 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 DMTF1Q9Y222 760 aa18.6■□□□□ 0.57
GTF3A-204ENST00000438571 A0A1W2PQU0 124 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 DRGXA6NNA5 263 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 E9PAM4 449 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 SLC31A1O15431 190 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 ENDOD1O94919 500 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 GABRB2P47870 512 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 SETMARQ53H47 684 aaPredicted RBP18.59■□□□□ 0.57
GTF3A-204ENST00000438571 FBXL19Q6PCT2 694 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 ZDHHC17Q8IUH5 632 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 OXR1Q8N573 874 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 DCAF4L2Q8NA75 395 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 TMEM145Q8NBT3 493 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 TMEM35BQ8NCS4 154 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 GRIN3AQ8TCU5 1115 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 CFAP57Q96MR6 1250 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 NAA15Q9BXJ9 866 aaKnown RBP18.59■□□□□ 0.57
GTF3A-204ENST00000438571 PDCL3Q9H2J4 239 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 CLSTN2Q9H4D0 955 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 PREBQ9HCU5 417 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 ZFR2Q9UPR6 939 aaKnown RBP18.59■□□□□ 0.57
GTF3A-204ENST00000438571 RP1P56715 2156 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 LRP4O75096 1905 aa18.59■□□□□ 0.57
GTF3A-204ENST00000438571 IGLV3-10A0A075B6K4 115 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 PRAMEF26H0Y7S4 382 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 TRIM38O00635 465 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 TLX3O43711 291 aaPredicted RBP18.58■□□□□ 0.56
GTF3A-204ENST00000438571 ZNF821O75541 412 aaPredicted RBP18.58■□□□□ 0.56
GTF3A-204ENST00000438571 MMEP08473 750 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 THEGLP0DJG4 465 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 CLDN2P57739 230 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 KRT83P78385 493 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 TARDBPQ13148 414 aaKnown RBP eCLIP18.58■□□□□ 0.56
GTF3A-204ENST00000438571 STAT4Q14765 748 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 ZNF284Q2VY69 593 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 PROX2Q3B8N5 592 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 KLHDC7AQ5VTJ3 777 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 SEL1L3Q68CR1 1132 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 BNIPLQ7Z465 357 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 IQCHQ86VS3 1027 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 FAM131BQ86XD5 332 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 EMC1Q8N766 993 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 C18orf8Q96DM3 657 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 DCBLD2Q96PD2 775 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 PPP1R9BQ96SB3 815 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 C2orf49Q9BVC5 232 aaPredicted RBP18.58■□□□□ 0.56
GTF3A-204ENST00000438571 SCUBE2Q9NQ36 999 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 SAMSN1Q9NSI8 373 aaKnown RBP18.58■□□□□ 0.56
GTF3A-204ENST00000438571 UCKL1Q9NWZ5 548 aa18.58■□□□□ 0.56
GTF3A-204ENST00000438571 RRN3Q9NYV6 651 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms