RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PIK3CD-AS1Q5SR53 167 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 AAGABQ6PD74 315 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 KDELC2Q7Z4H8 507 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 GLCCI1Q86VQ1 547 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 HEATR4Q86WZ0 1026 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 TMTC1Q8IUR5 882 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 TMEM217Q8N7C4 229 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 NRACQ8N912 160 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 SCAIQ8N9R8 606 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 NAXEQ8NCW5 288 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 EME1Q96AY2 570 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 RNFT2Q96EX2 444 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZNF419Q96HQ0 510 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 TEFMQ96QE5 360 aaKnown RBP3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 NPLQ9BXD5 320 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 CTDSP1Q9GZU7 261 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 TASP1Q9H6P5 420 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZNF304Q9HCX3 659 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 TMEM160Q9NX00 188 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 MSRB1Q9NZV6 116 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 HEY2Q9UBP5 337 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZNF69Q9UC07 566 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 OSGIN2Q9Y236 505 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 HS3ST3B1Q9Y662 390 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 CCDC196A0A1B0GTZ2 297 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 A0A1B0GVC2 190 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 SOCS2O14508 198 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 EPB41L2O43491 1005 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 XBP1P17861 261 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 PRKCHP24723 683 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 KLRC2P26717 231 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 PTGER1P34995 402 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 PSMC2P35998 433 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 SLC16A2P36021 539 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 MTNR1AP48039 350 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 ME1P48163 572 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 ALDH7A1P49419 539 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 TBX2Q13207 712 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 IL13RA2Q14627 380 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 AP5B1Q2VPB7 878 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 NAA35Q5VZE5 725 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 TMEM268Q5VZI3 342 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 GJB7Q6PEY0 223 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 B4GALNT4Q76KP1 1039 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 SLC25A41Q8N5S1 370 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 DPP10Q8N608 796 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 HDAC7Q8WUI4 952 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 FAR1Q8WVX9 515 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 STAMQ92783 540 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 SEC62Q99442 399 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 CD180Q99467 661 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 GPR63Q9BZJ6 419 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 TAOK3Q9H2K8 898 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 HIPK3Q9H422 1215 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 TTC12Q9H892 705 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 PNRC2Q9NPJ4 139 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 SEMA4BQ9NPR2 832 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 TLR8Q9NR97 1041 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 DECR2Q9NUI1 292 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 FBXO40Q9UH90 709 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 SLC13A4Q9UKG4 626 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 PCDHA12Q9UN75 941 aa3.97□□□□□ -1.77
TRAPPC13-204ENST00000438419 TRBV5-7A0A0A0MS05 114 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 OR6C68A6NDL8 312 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 C17orf100A8MU93 164 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZNF814B7Z6K7 855 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 J3KRW8 73 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 HOXC11O43248 304 aaPredicted RBP3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 KIF1CO43896 1103 aaKnown RBP3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZC3H11AO75152 810 aaKnown RBP eCLIP3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 GUCY1B2O75343 617 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 DDAH2O95865 285 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 IFIT1P09914 478 aaKnown RBP3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 ITGB6P18564 788 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 HNF1BP35680 557 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 GPD2P43304 727 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 GAD2Q05329 585 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 ENTPD8Q5MY95 495 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 TTLL5Q6EMB2 1281 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 RETSATQ6NUM9 610 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 LRRC8DQ7L1W4 858 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 MAATS1Q7Z4T9 603 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 MMP21Q8N119 569 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 MSI2Q96DH6 328 aaKnown RBP3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 PPM1MQ96MI6 270 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 WASH6PQ9NQA3 447 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 ALKBH4Q9NXW9 302 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 ICKQ9UPZ9 632 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 SLC4A4Q9Y6R1 1079 aa3.96□□□□□ -1.77
TRAPPC13-204ENST00000438419 GAGE12JA6NER3 117 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 SH2D7A6NKC9 451 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 A6NLC8 198 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 TULP3O75386 442 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 TMCC1O94876 653 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 FGF2P09038 288 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 TNFAIP3P21580 790 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 PGM1P36871 562 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 TUBP50607 506 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 CLCNKBP51801 687 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 MST1RQ04912 1400 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms