RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SERGEFQ9UGK8 458 aa7.99□□□□□ -1.13
VPS50-204ENST00000438395 ADAMTS1Q9UHI8 967 aa7.99□□□□□ -1.13
VPS50-204ENST00000438395 XPO7Q9UIA9 1087 aaKnown RBP7.99□□□□□ -1.13
VPS50-204ENST00000438395 SLCO3A1Q9UIG8 710 aa7.99□□□□□ -1.13
VPS50-204ENST00000438395 INTS6Q9UL03 887 aaKnown RBP7.99□□□□□ -1.13
VPS50-204ENST00000438395 RAXQ9Y2V3 346 aa7.99□□□□□ -1.13
VPS50-204ENST00000438395 GOLGA4Q13439 2230 aaKnown RBP7.99□□□□□ -1.13
VPS50-204ENST00000438395 ITIH6Q6UXX5 1313 aa7.99□□□□□ -1.13
VPS50-204ENST00000438395 CKAP5Q14008 2032 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 ADAMTS9Q9P2N4 1935 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 IGSF10Q6WRI0 2623 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 A0A1B0GTQ1 180 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 FAM149AA5PLN7 773 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 TLR4O00206 839 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 PES1O00541 588 aaKnown RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 ENC1O14682 589 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 SLC7A4O43246 635 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 CLDN11O75508 207 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 RFPL3O75679 317 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 LDOC1O95751 146 aaPredicted RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 FYNP06241 537 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 JUPP14923 745 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 RECQLP46063 649 aaPredicted RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 MTIF2P46199 727 aaKnown RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 RPL34P49207 117 aaKnown RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 NUMBP49757 651 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 MARSP56192 900 aaKnown RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 KRT83P78385 493 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 CENPCQ03188 943 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 CYP4F3Q08477 520 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 OVGP1Q12889 678 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 NUMA1Q14980 2115 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 EXOC3L4Q17RC7 722 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 COL28A1Q2UY09 1125 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 SETMARQ53H47 684 aaPredicted RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 OR6B2Q6IFH4 312 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 TRIM65Q6PJ69 517 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 LRRC31Q6UY01 552 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 DBX2Q6ZNG2 339 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 C11orf57Q6ZUT1 292 aaPredicted RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 TMEM110Q86TL2 294 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 PDZD3Q86UT5 571 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 TMPRSS12Q86WS5 348 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 APCDD1Q8J025 514 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 DEFB106AQ8N104 65 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 AADATQ8N5Z0 425 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 MSANTD4Q8NCY6 345 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 ZNF606Q8WXB4 792 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 MYEOVQ96EZ4 313 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 MYO19Q96H55 970 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 CNDP2Q96KP4 475 aaKnown RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 LMLNQ96KR4 655 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 C2orf49Q9BVC5 232 aaPredicted RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 ASNSD1Q9NWL6 643 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 CUEDC1Q9NWM3 386 aaPredicted RBP7.98□□□□□ -1.13
VPS50-204ENST00000438395 APEX2Q9UBZ4 518 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 RWDD2AQ9UIY3 292 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 VANGL2Q9ULK5 521 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 STAP1Q9ULZ2 295 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 CNTN6Q9UQ52 1028 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 DMTF1Q9Y222 760 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 PCDHGA1Q9Y5H4 931 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 ASPMQ8IZT6 3477 aa7.98□□□□□ -1.13
VPS50-204ENST00000438395 TRABD2BA6NFA1 517 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 E9PAM4 449 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 KPNA3O00505 521 aaPredicted RBP7.97□□□□□ -1.13
VPS50-204ENST00000438395 ALOX15BO15296 676 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 RTN2O75298 545 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 DAB1O75553 588 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 GRAP2O75791 330 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 IGLV3-25P01717 112 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 RHOCP08134 193 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 C1SP09871 688 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 VAV1P15498 845 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 EPHA8P29322 1005 aaPredicted RBP7.97□□□□□ -1.13
VPS50-204ENST00000438395 MAT2AP31153 395 aaKnown RBP7.97□□□□□ -1.13
VPS50-204ENST00000438395 NXPH1P58417 271 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 BPIFB4P59827 614 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 AUHQ13825 339 aaKnown RBP7.97□□□□□ -1.13
VPS50-204ENST00000438395 KCNJ12Q14500 433 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 STAT4Q14765 748 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 TAF5Q15542 800 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 SMAD1Q15797 465 aaKnown RBP7.97□□□□□ -1.13
VPS50-204ENST00000438395 POM121L1PQ3SYA9 428 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 KCNT1Q5JUK3 1230 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 PRAMEF14Q5SWL7 426 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 FBXL22Q6P050 247 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 LYSMD3Q7Z3D4 306 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 IQCHQ86VS3 1027 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 FAM114A1Q8IWE2 563 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 EID2Q8N6I1 236 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 MFSD2AQ8NA29 543 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 ATP11CQ8NB49 1132 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 C1orf131Q8NDD1 294 aaKnown RBP7.97□□□□□ -1.13
VPS50-204ENST00000438395 HNRNPLLQ8WVV9 542 aaKnown RBP7.97□□□□□ -1.13
VPS50-204ENST00000438395 SHC3Q92529 594 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 LRIG1Q96JA1 1093 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 SLC2A13Q96QE2 648 aa7.97□□□□□ -1.13
VPS50-204ENST00000438395 CPXM1Q96SM3 734 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms