RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 TMCC1O94876 653 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 MYL1P05976 194 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 ANXA6P08133 673 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 AKT1P31749 480 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 ALDH18A1P54886 795 aaKnown RBP3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 FAM3BP58499 235 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 RBM6P78332 1123 aaKnown RBP3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 BNC1Q01954 994 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 IFIT5Q13325 482 aaKnown RBP3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 SLC35G1Q2M3R5 365 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 ZNF569Q5MCW4 686 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 HIST2H2BCQ6DN03 193 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 ADAM5Q6NVV9 412 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 ZNF449Q6P9G9 518 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 MON1BQ7L1V2 547 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 TMEM200AQ86VY9 491 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 CCDC146Q8IYE0 955 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 LMNTD1Q8N9Z9 388 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 CLEC4CQ8WTT0 213 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 SARGQ9BW04 601 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 NECTIN3Q9NQS3 549 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 ERCC6Q03468 1493 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 ZCCHC6Q5VYS8 1495 aaKnown RBP3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 WDR81Q562E7 1941 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 SAA2-SAA4A0A096LPE2 208 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 IGLV5-52A0A0A0MRZ9 124 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 KIF28PB7ZC32 967 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 ITM2AO43736 263 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 TRIM27P14373 513 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 OAZ1P54368 228 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 SF3B4Q15427 424 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 PLK5Q496M5 336 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 C5orf22Q49AR2 442 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 STPG1Q5TH74 334 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 VWA5B1Q5TIE3 1220 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 PMS2CLQ68D20 193 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 RINT1Q6NUQ1 792 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 HIBCHQ6NVY1 386 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 C11orf96Q7Z7L8 435 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 DCUN1D3Q8IWE4 304 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 ENDOVQ8N8Q3 282 aaKnown RBP3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 TMEM163Q8TC26 289 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 ZNF566Q969W8 418 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 TXNDC15Q96J42 360 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 IL17FQ96PD4 163 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 SLC25A33Q9BSK2 321 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 ZNF700Q9H0M5 742 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 ARNT2Q9HBZ2 717 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 DDX21Q9NR30 783 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 MALT1Q9UDY8 824 aa3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 AGO1Q9UL18 857 aaKnown RBP3.45□□□□□ -1.86
HMGB1P31-201ENST00000437242 SMARCA2P51531 1590 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 SERINC4A6NH21 518 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 LMX1BO60663 402 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 AMD1P17707 334 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 EEF1GP26641 437 aaKnown RBP3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 KLRK1P26718 216 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 EXOC3L1Q86VI1 746 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 POC1AQ8NBT0 407 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 TBCBQ99426 244 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 Q9N2J8 555 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 CDH22Q9UJ99 828 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 SLC25A13Q9UJS0 675 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 CEP83Q9Y592 693 aa3.44□□□□□ -1.86
HMGB1P31-201ENST00000437242 ANO9A1A5B4 782 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 C17orf102A2RUQ5 167 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 MBD3L5A6NJ08 208 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 SLC38A8A6NNN8 435 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 EYA2O00167 538 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 CLGNO14967 610 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 HLA-DQA2P01906 255 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 MMP3P08254 477 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 ENO3P13929 434 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 HOXB9P17482 250 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 GM2AP17900 193 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 PRKCHP24723 683 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 SF3A3Q12874 501 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 ILF3Q12906 894 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 HDAC1Q13547 482 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 PKP1Q13835 747 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 SAFBQ15424 915 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 RAB30Q15771 203 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 NRSN1Q8IZ57 195 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 NAGSQ8N159 534 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 NEXN-AS1Q8NBZ9 246 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 PJA1Q8NG27 643 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 SPATA20Q8TB22 786 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 UHRF2Q96PU4 802 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 MECRQ9BV79 373 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 GAREM1Q9H706 876 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 TM7SF3Q9NS93 570 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 MMP24Q9Y5R2 645 aa3.43□□□□□ -1.86
HMGB1P31-201ENST00000437242 IGLV5-37A0A075B6J1 123 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 TMEM247A6NEH6 219 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 KDM4EB2RXH2 506 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 HSPB6O14558 160 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms