RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 CHPFQ8IZ52 775 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 ATP11CQ8NB49 1132 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 ACTL9Q8TC94 416 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 COG1Q8WTW3 980 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 CCDC114Q96M63 670 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 CEP44Q9C0F1 390 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 THAP10Q9P2Z0 257 aaPredicted RBP13.75□□□□□ -0.21
EXT1-203ENST00000437196 SUN2Q9UH99 717 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 AMACRQ9UHK6 382 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 NYNRINQ9P2P1 1898 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 CFAP69A5D8W1 941 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 H7C0C1 242 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 MATN3O15232 486 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 SNAP91O60641 907 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 ZMPSTE24O75844 475 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 STK10O94804 968 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 RBP3P10745 1247 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 CHRNB1P11230 501 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 PECAM1P16284 738 aaPredicted RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 TARSP26639 723 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 HSPA9P38646 679 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 KIR2DL1P43626 348 aaPredicted RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 ATP5OP48047 213 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 SERPINH1P50454 418 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 EIF3EP60228 445 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 ARF5P84085 180 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 MESP2Q0VG99 397 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 AP1B1Q10567 949 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 HNRNPDQ14103 355 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 CCNG2Q16589 344 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 SLC45A4Q5BKX6 768 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 HEATR6Q6AI08 1181 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 NPNTQ6UXI9 565 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 SERPINA13PQ6UXR4 307 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 ZC3H18Q86VM9 953 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 SH2D3CQ8N5H7 860 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 PJA1Q8NG27 643 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 ISG20Q96AZ6 181 aaKnown RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 VAT1Q99536 393 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 LMAN1LQ9HAT1 526 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 SAE1Q9UBE0 346 aaPredicted RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 SIT1Q9Y3P8 196 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
EXT1-203ENST00000437196 ATG2BQ96BY7 2078 aa13.74□□□□□ -0.21
EXT1-203ENST00000437196 SHISA7A6NL88 538 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 KRIT1O00522 736 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 ATP9BO43861 1147 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 RNF40O75150 1001 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 URI1O94763 535 aaPredicted RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 NTSR1P30989 418 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 STIP1P31948 543 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 TIE1P35590 1138 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 RECQLP46063 649 aaPredicted RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 RPS9P46781 194 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 SEC13P55735 322 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 LMNB2Q03252 620 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 CKAP4Q07065 602 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 BYSLQ13895 437 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 ZNF234Q14588 700 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 ZNF235Q14590 738 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 STARD3Q14849 445 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 ACCSLQ4AC99 568 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 EOGTQ5NDL2 527 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 MARC1Q5VT66 337 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 DRICH1Q6PGQ1 229 aaPredicted RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 DARS2Q6PI48 645 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 ADAT2Q7Z6V5 191 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 PCDH20Q8N6Y1 951 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 FLCNQ8NFG4 579 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 CYB5D2Q8WUJ1 264 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 RPL10LQ96L21 214 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 QKIQ96PU8 341 aaKnown RBP eCLIP13.73□□□□□ -0.211e-8■■■■■ 37.5
EXT1-203ENST00000437196 LGMNQ99538 433 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 HERPUD2Q9BSE4 406 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 CINPQ9BW66 212 aaPredicted RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 PDFQ9HBH1 243 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 SEPT3Q9UH03 358 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 FEZ2Q9UHY8 353 aaPredicted RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 TECTAO75443 2155 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 BCLAF3A2AJT9 711 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 TMEM221A6NGB7 291 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 CHURC1-FNTBB4DL54 471 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 J3KR12 359 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 M0R296 226 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 TNFRSF10AO00220 468 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 ZNF185O15231 689 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 MAP3K6O95382 1288 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 SRCP12931 536 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 CCNB1P14635 433 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 GLDCP23378 1020 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 CTSOP43234 321 aaPredicted RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 LBRQ14739 615 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 PRKD1Q15139 912 aaPredicted RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 PTPRNQ16849 979 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 C2orf27AQ580R0 203 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 DNTTIP2Q5QJE6 756 aaKnown RBP13.73□□□□□ -0.21
EXT1-203ENST00000437196 EGFLAMQ63HQ2 1017 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 LINGO4Q6UY18 593 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 CREG2Q8IUH2 290 aa13.73□□□□□ -0.21
EXT1-203ENST00000437196 TP53INP2Q8IXH6 220 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms