RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 ORAI3Q9BRQ5 295 aa8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 DNAI2Q9GZS0 605 aa8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 GZF1Q9H116 711 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 NMUR1Q9HB89 426 aa8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 GDF3Q9NR23 364 aa8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 SUN2Q9UH99 717 aa8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 DCTN4Q9UJW0 460 aa8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 FBXO2Q9UK22 296 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 AGO1Q9UL18 857 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 STRIP2Q9ULQ0 834 aa8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 NCKAP1Q9Y2A7 1128 aa8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 MORC2Q9Y6X9 1032 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-208ENST00000436412 B8ZZF3 427 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 ARHGAP6O43182 974 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 TGFB1I1O43294 461 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 CLSTN1O94985 981 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 IGHV4-34P06331 123 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 ATP5BP06576 529 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 NDST1P52848 882 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 E2F1Q01094 437 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 IL9RQ01113 521 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 AMPD3Q01432 767 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 CCDC173Q0VFZ6 552 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 DNAJC3Q13217 504 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 BROXQ5VW32 411 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 ZNF776Q68DI1 518 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 KIAA0895LQ68EN5 471 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 LAYNQ6UX15 382 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 SCARA5Q6ZMJ2 495 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 GPRIN1Q7Z2K8 1008 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 SCD5Q86SK9 330 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 ERICH1Q86X53 443 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 GATAD2AQ86YP4 633 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 DENND1CQ8IV53 801 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 FAM217AQ8IXS0 508 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 LSMEM2Q8N112 164 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 ARHGAP18Q8N392 663 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 OXR1Q8N573 874 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 DCBLD1Q8N8Z6 715 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 C12orf29Q8N999 325 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 STK35Q8TDR2 534 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 SORCS1Q8WY21 1168 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 TMX3Q96JJ7 454 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 ZNF578Q96N58 590 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 CLIC6Q96NY7 704 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 TNMDQ9H2S6 317 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 ERVMER34-1Q9H9K5 563 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 PRSS16Q9NQE7 514 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 FAM49BQ9NUQ9 324 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 ZC3H7BQ9UGR2 993 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 NUDT5Q9UKK9 219 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 CLEC4EQ9ULY5 219 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 CLCA2Q9UQC9 943 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 SMC3Q9UQE7 1217 aa8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 TP53BP1Q12888 1972 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-208ENST00000436412 LRRC72A6NJI9 287 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 CLIC2O15247 247 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 PAX4O43316 350 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 EXOC3O60645 756 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 RNASEH1O60930 286 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 GSTP1P09211 210 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 DLDP09622 509 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 C6P13671 934 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 CKMT2P17540 419 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 GLDCP23378 1020 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 CD38P28907 300 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 ADORA2BP29275 332 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 EPHA8P29322 1005 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 RXRGP48443 463 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 CCR5P51681 352 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 TMPRSS3P57727 454 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 EFEMP1Q12805 493 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 RABEP1Q15276 862 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 SLC45A4Q5BKX6 768 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 FAM26FQ5R3K3 315 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 SFMBT2Q5VUG0 894 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 CNNM4Q6P4Q7 775 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 KIAA0907Q7Z7F0 614 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 AHI1Q8N157 1196 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 EID2Q8N6I1 236 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 ZNF557Q8N988 423 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 GOLGA5Q8TBA6 731 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 PARD3BQ8TEW8 1205 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 SNRNP27Q8WVK2 155 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 CYFIP2Q96F07 1278 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 FANCD2OSQ96PS1 177 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 LGMNQ99538 433 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 NT5C1AQ9BXI3 368 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 DUSP16Q9BY84 665 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 SDCBP2Q9H190 292 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 RSPH9Q9H1X1 276 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 PABPC3Q9H361 631 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 CUEDC2Q9H467 287 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 AASDHPPTQ9NRN7 309 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 MARCH2Q9P0N8 246 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 ADAMTS1Q9UHI8 967 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 RASAL2Q9UJF2 1139 aa8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-208ENST00000436412 CLIC4Q9Y696 253 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms