RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 TBC1D3CQ6IPX1 549 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 C19orf48Q6RUI8 117 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 ARCQ7LC44 396 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 DSG4Q86SJ6 1040 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 SETD3Q86TU7 594 aaPredicted RBP6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 NOP9Q86U38 636 aaKnown RBP6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 PDZD3Q86UT5 571 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 TBC1D3Q8IZP1 549 aaPredicted RBP6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 CACTIN-AS1Q8N1I8 211 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 SLC25A45Q8N413 288 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 PDCD7Q8N8D1 485 aaKnown RBP6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 DCAF4L2Q8NA75 395 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 CHST14Q8NCH0 376 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 TMIEQ8NEW7 156 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 EPS8L1Q8TE68 723 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 RFFLQ8WZ73 363 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 ARRDC3Q96B67 414 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 SKA1Q96BD8 255 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 CNDP2Q96KP4 475 aaKnown RBP6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 BBC3Q96PG8 261 aaPredicted RBP6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 NOX5Q96PH1 765 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 PPP1R9BQ96SB3 815 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 TBCBQ99426 244 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 TUBGCP2Q9BSJ2 902 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 TKTL2Q9H0I9 626 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 SIK2Q9H0K1 926 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 CLSTN2Q9H4D0 955 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 CAAP1Q9H8G2 361 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 PREBQ9HCU5 417 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 FTSJ1Q9UET6 329 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 SLC25A13Q9UJS0 675 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 VPS28Q9UK41 221 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 ZFR2Q9UPR6 939 aaKnown RBP6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 NEU3Q9UQ49 428 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 CA5BQ9Y2D0 317 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 FHOD1Q9Y613 1164 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 ATMQ13315 3056 aa6.33□□□□□ -1.4
PNKDP1-201ENST00000435914 TDRD6O60522 2096 aaKnown RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 CFAP46Q8IYW2 2715 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ILVBLA1L0T0 632 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 C1QTNF3-AMACRE9PGA6 284 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 F8VZ95 297 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 PRAMEF26H0Y7S4 382 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 TRIM38O00635 465 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 RNGTTO60942 597 aaKnown RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 RFPL3O75679 317 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 LDOC1O95751 146 aaPredicted RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 LSM8O95777 96 aaKnown RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 F9P00740 461 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ITGAVP06756 1048 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 RHOCP08134 193 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 CDK4P11802 303 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 UCHL3P15374 230 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 GLDCP23378 1020 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 RRM1P23921 792 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ACP1P24666 158 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ERCC5P28715 1186 aaPredicted RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 MAT2AP31153 395 aaKnown RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 CHRNA3P32297 505 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 KRT9P35527 623 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 MTIF2P46199 727 aaKnown RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ARRB1P49407 418 aaPredicted RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 SULT1E1P49888 294 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 CLCN6P51797 869 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 BPIFB4P59827 614 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 NOMO3P69849 1222 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ARF5P84085 180 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 NRG1Q02297 640 aaPredicted RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ILKQ13418 452 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 COL9A2Q14055 689 aaPredicted RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 FGL2Q14314 439 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 RTP5Q14D33 572 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ZNF284Q2VY69 593 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 POM121L1PQ3SYA9 428 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ACCSLQ4AC99 568 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 SETMARQ53H47 684 aaPredicted RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 RAB6CQ53S08 254 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 C2CD6Q53TS8 623 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 NEK5Q6P3R8 708 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 C22orf39Q6P5X5 142 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 GCNT7Q6ZNI0 430 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 DPY19L3Q6ZPD9 716 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 ABI3BPQ7Z7G0 1075 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 PRPF39Q86UA1 669 aaKnown RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 SLC22A18ASQ8N1D0 253 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 OXR1Q8N573 874 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 EID2Q8N6I1 236 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 TMEM35BQ8NCS4 154 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 OR7D4Q8NG98 312 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 RNF34Q969K3 372 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 C18orf8Q96DM3 657 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 HAPLN3Q96S86 360 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 C2orf49Q9BVC5 232 aaPredicted RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 HDAC8Q9BY41 377 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 RAB6CQ9H0N0 254 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 GANQ9H2C0 597 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 WDCPQ9H6R7 721 aa6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 SAMSN1Q9NSI8 373 aaKnown RBP6.32□□□□□ -1.4
PNKDP1-201ENST00000435914 NDFIP2Q9NV92 336 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms