RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 SORCS1Q8WY21 1168 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 HDAC11Q96DB2 347 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 RPL10LQ96L21 214 aaKnown RBP16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 TSGA13Q96PP4 275 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 CEP44Q9C0F1 390 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 CHRDQ9H2X0 955 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 FBRSQ9HAH7 460 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 RBM12Q9NTZ6 932 aaKnown RBP16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 MTF2Q9Y483 593 aaPredicted RBP16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 MFHAS1Q9Y4C4 1052 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 STON1Q9Y6Q2 735 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 COL6A3P12111 3177 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 GOLGA6L10A0A0M3HER8 536 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 EDDM13A0A1B0GTR0 161 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 PGRMC1O00264 195 aaKnown RBP16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 RNASEH1O60930 286 aaKnown RBP16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 ZMPSTE24O75844 475 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 HSPA9P38646 679 aaKnown RBP16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 PAFAH1B1P43034 410 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 AP1B1Q10567 949 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 ZNF235Q14590 738 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 EMC10Q5UCC4 262 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 PAPD7Q5XG87 772 aaKnown RBP16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 DSG4Q86SJ6 1040 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 CCDC13Q8IYE1 715 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 SPEM1Q8N4L4 309 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 FBXL6Q8N531 539 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 SH2D3CQ8N5H7 860 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 ALLCQ8N6M5 410 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 IL17RCQ8NAC3 791 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 ISG20Q96AZ6 181 aaKnown RBP16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 CINPQ9BW66 212 aaPredicted RBP16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 C1QTNF1Q9BXJ1 281 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 POLMQ9NP87 494 aaPredicted RBP16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 CACNA2D2Q9NY47 1150 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 RNF14Q9UBS8 474 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 SEPT3Q9UH03 358 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 MMP17Q9ULZ9 603 aa16.86■□□□□ 0.29
CTDSPL-204ENST00000435525 TARSL2A2RTX5 802 aaKnown RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 MATN3O15232 486 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 ATP9BO43861 1147 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 ALDH1A2O94788 518 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 EPHX1P07099 455 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 DCNP07585 359 aaKnown RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 HOXB2P14652 356 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 CTSOP43234 321 aaPredicted RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 EIF3EP60228 445 aaKnown RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 RHOAP61586 193 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 OTUD4Q01804 1114 aaKnown RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 RAD51Q06609 339 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 NOMO1Q15155 1222 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 DLG2Q15700 870 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 MARC1Q5VT66 337 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 AADACL2Q6P093 401 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 DARS2Q6PI48 645 aaKnown RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 NPNTQ6UXI9 565 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 LINGO4Q6UY18 593 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 NYAP1Q6ZVC0 841 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 SFTPA1Q8IWL2 248 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 ZNF687Q8N1G0 1237 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 CCDC33Q8N5R6 958 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 PCDH20Q8N6Y1 951 aaKnown RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 TXNDC5Q8NBS9 432 aaKnown RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 ACTL9Q8TC94 416 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 EZH1Q92800 747 aaPredicted RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 FATE1Q969F0 183 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 AMACRQ9UHK6 382 aa16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 TTC7AQ9ULT0 858 aaPredicted RBP16.85■□□□□ 0.29
CTDSPL-204ENST00000435525 COL4A2P08572 1712 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 J3KR12 359 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 MAFKO60675 156 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 TMCC1O94876 653 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 MAP3K6O95382 1288 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 IGSF6O95976 241 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 PDGFBP01127 241 aaPredicted RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 SRCP12931 536 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 PECAM1P16284 738 aaPredicted RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 GLDCP23378 1020 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 IL12RB1P42701 662 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 NUMBP49757 651 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 STK19P49842 368 aaPredicted RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 CCR3P51677 355 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 DGKEP52429 567 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 SNRPD1P62314 119 aaKnown RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 ARF5P84085 180 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 SFSWAPQ12872 951 aaKnown RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 SLC10A2Q12908 348 aaPredicted RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 HNRNPDQ14103 355 aaKnown RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 LBRQ14739 615 aaKnown RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 PTPRNQ16849 979 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 HNRNPA1L2Q32P51 320 aaKnown RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 CWF19L1Q69YN2 538 aaKnown RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 HEATR6Q6AI08 1181 aaKnown RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 C22orf39Q6P5X5 142 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 SYT13Q7L8C5 426 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 ZC3H18Q86VM9 953 aaKnown RBP16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 RASGEF1CQ8N431 466 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 ZNF592Q92610 1267 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms