RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 LIN7AO14910 233 aaPredicted RBP18.92■□□□□ 0.62
CLK1-205ENST00000434813 SIN3BO75182 1162 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 PAX3P23760 479 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 CCNCP24863 283 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 NMBRP28336 390 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 CPOXP36551 454 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 IRF9Q00978 393 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 SLC34A1Q06495 639 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 GRIK3Q13003 919 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 THOC5Q13769 683 aaKnown RBP18.92■□□□□ 0.62
CLK1-205ENST00000434813 MAPRE1Q15691 268 aaKnown RBP18.92■□□□□ 0.62
CLK1-205ENST00000434813 KCNA10Q16322 511 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 PAN2Q504Q3 1202 aaKnown RBP18.92■□□□□ 0.62
CLK1-205ENST00000434813 BRMS1LQ5PSV4 323 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 PDPK2PQ6A1A2 396 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 ARHGAP12Q8IWW6 846 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 TNS4Q8IZW8 715 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 CAB39LQ9H9S4 337 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 IARS2Q9NSE4 1012 aaKnown RBP18.92■□□□□ 0.62
CLK1-205ENST00000434813 UBP1Q9NZI7 540 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 SRRDQ9UH36 339 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 MID2Q9UJV3 735 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 AAR2Q9Y312 384 aaKnown RBP18.92■□□□□ 0.62
CLK1-205ENST00000434813 TDRD15B5MCY1 1934 aaKnown RBP18.92■□□□□ 0.62
CLK1-205ENST00000434813 FGF10O15520 208 aaPredicted RBP18.91■□□□□ 0.62
CLK1-205ENST00000434813 MGEA5O60502 916 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 H2AFYO75367 372 aaKnown RBP18.91■□□□□ 0.62
CLK1-205ENST00000434813 CIB2O75838 187 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 POMCP01189 267 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 C2P06681 752 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 TPH1P17752 444 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 CAP1Q01518 475 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 DLG2Q15700 870 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 RWDD4Q6NW29 188 aaKnown RBP18.91■□□□□ 0.62
CLK1-205ENST00000434813 ATPAF2Q8N5M1 289 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 DNAJC5GQ8N7S2 189 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 SREK1Q8WXA9 508 aaKnown RBP18.91■□□□□ 0.62
CLK1-205ENST00000434813 DNAJC9Q8WXX5 260 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 HAPLN3Q96S86 360 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 GPR22Q99680 433 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 NMRK1Q9NWW6 199 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 PADI3Q9ULW8 664 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 CDY1Q9Y6F8 540 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 NUP205Q92621 2012 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 CASP8AP2Q9UKL3 1982 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 NVLO15381 856 aaKnown RBP18.91■□□□□ 0.62
CLK1-205ENST00000434813 TBX10O75333 385 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 F7P08709 466 aaPredicted RBP18.91■□□□□ 0.62
CLK1-205ENST00000434813 SRGAP2BP0DMP2 458 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 CD52P31358 61 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 ABCG1P45844 678 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 SESN3P58005 492 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 TUSC3Q13454 348 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 DSC3Q14574 896 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 ANO4Q32M45 955 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 MANEALQ5VSG8 457 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 OTOP3Q7RTS5 596 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 PCSK9Q8NBP7 692 aaKnown RBP18.91■□□□□ 0.62
CLK1-205ENST00000434813 NMRAL1Q9HBL8 299 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 SLC7A8Q9UHI5 535 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 MAGED2Q9UNF1 606 aaPredicted RBP18.91■□□□□ 0.62
CLK1-205ENST00000434813 ANKRD6Q9Y2G4 727 aa18.91■□□□□ 0.62
CLK1-205ENST00000434813 A0A0U1RQF3 1178 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 DFFAO00273 331 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 APOA4P06727 396 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 MXRA7P84157 204 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 MUM1Q2TAK8 710 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 C6orf163Q5TEZ5 329 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 SNX30Q5VWJ9 437 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 OVOS1Q6IE37 1185 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 ARHGAP36Q6ZRI8 547 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 LRRTM3Q86VH5 581 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 ZC3HC1Q86WB0 502 aaKnown RBP18.9■□□□□ 0.62
CLK1-205ENST00000434813 LZTR1Q8N653 840 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 RDH11Q8TC12 318 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 CD99L2Q8TCZ2 262 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 RAET1EQ8TD07 263 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 RSPH1Q8WYR4 309 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 ZNF333Q96JL9 665 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 UROC1Q96N76 676 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 FCRL5Q96RD9 977 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 TMEM209Q96SK2 561 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 IL12RB2Q99665 862 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 TBL1YQ9BQ87 522 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 THTPAQ9BU02 230 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 CFHR5Q9BXR6 569 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 CDH19Q9H159 772 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 SMOC2Q9H3U7 446 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 RHOJQ9H4E5 214 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 ABCC13Q9NSE7 274 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 ABL2P42684 1182 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 ACTR3P61158 418 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 BLMHQ13867 455 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 GRM3Q14832 879 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 NAPRTQ6XQN6 538 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 LRRC74BQ6ZQY2 392 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 RIPOR1Q6ZS17 1223 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 LCA5Q86VQ0 697 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 CCDC117Q8IWD4 279 aaPredicted RBP18.9■□□□□ 0.62
CLK1-205ENST00000434813 CNTN4Q8IWV2 1026 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms