RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 MEIS3P2A8K0S8 358 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 MATN3O15232 486 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 CCNT2O60583 730 aaKnown RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 TBX10O75333 385 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
CD44-210ENST00000434472 ANPEPP15144 967 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 PAMP19021 973 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 NCF2P19878 526 aaPredicted RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 BDNFP23560 247 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 RABGGTBP53611 331 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 NRG1Q02297 640 aaPredicted RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 KLC1Q07866 573 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 TUSC3Q13454 348 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 OLIG2Q13516 323 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 EIF4EBP2Q13542 120 aaPredicted RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 LBRQ14739 615 aaKnown RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 GNASQ5JWF2 1037 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 GDF6Q6KF10 455 aaPredicted RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 RWDD4Q6NW29 188 aaKnown RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 RAPH1Q70E73 1250 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 MAVSQ7Z434 540 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 SETD3Q86TU7 594 aaPredicted RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 ZC3HC1Q86WB0 502 aaKnown RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 CNTN4Q8IWV2 1026 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 PLD6Q8N2A8 252 aaKnown RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 ZSCAN18Q8TBC5 510 aaPredicted RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 ACTRT2Q8TDY3 377 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 PKMYT1Q99640 499 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 OSBPL1AQ9BXW6 950 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 UPF3AQ9H1J1 476 aaKnown RBP10.6□□□□□ -0.71
CD44-210ENST00000434472 VCXQ9H320 206 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 ENTPD7Q9NQZ7 604 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 CHRAC1Q9NRG0 131 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 TMEM30AQ9NV96 361 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 OXSMQ9NWU1 459 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 NDE1Q9NXR1 346 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 IL1RAPL1Q9NZN1 696 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 SLC7A8Q9UHI5 535 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 SNX10Q9Y5X0 201 aa10.6□□□□□ -0.71
CD44-210ENST00000434472 A0A088AWK7 358 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 A6NHS1 94 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 DFFAO00273 331 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 TNPO2O14787 897 aaKnown RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 NEBLO76041 1014 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 CHRNA1P02708 482 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 AMHP03971 560 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 TPH1P17752 444 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 IGFBP6P24592 240 aaPredicted RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 NMBRP28336 390 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 CRABP2P29373 138 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 ADSLP30566 484 aaPredicted RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 CCR1P32246 355 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 CSRP3P50461 194 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 ILF2Q12905 390 aaKnown RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 PRKAA1Q13131 559 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 USP10Q14694 798 aaKnown RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 PPP2R5DQ14738 602 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 GRM3Q14832 879 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 LIPMQ5VYY2 423 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 OVOS1Q6IE37 1185 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 ANO7Q6IWH7 933 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 CNTD1Q8N815 330 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 TDRD5Q8NAT2 981 aaKnown RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 FBXO27Q8NI29 283 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 MICAL1Q8TDZ2 1067 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 RSPH1Q8WYR4 309 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 AZIN2Q96A70 460 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 ATXN7L3BQ96GX2 97 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 CELF6Q96J87 481 aaKnown RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 PANX3Q96QZ0 392 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 APOL2Q9BQE5 337 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 RTKNQ9BST9 563 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 FAM167BQ9BTA0 163 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 CCDC28BQ9BUN5 200 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 ACE2Q9BYF1 805 aaPredicted RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 PPP1R12CQ9BZL4 782 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 PRKD2Q9BZL6 878 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 UBE2OQ9C0C9 1292 aaKnown RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 DRC3Q9H069 523 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 VCX3BQ9H321 246 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 SMOC2Q9H3U7 446 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 TASP1Q9H6P5 420 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 COG4Q9H9E3 785 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 TBC1D13Q9NVG8 400 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 ZNF358Q9NW07 568 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 DONSONQ9NYP3 566 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 CACNG4Q9UBN1 327 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 SLC39A10Q9ULF5 831 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 ARHGAP26Q9UNA1 814 aa10.59□□□□□ -0.71
CD44-210ENST00000434472 TRIP12Q14669 1992 aaPredicted RBP10.59□□□□□ -0.71
CD44-210ENST00000434472 A0A087X1B8 175 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 GOLGA8QA0A0J9YX86 632 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 GOLGA8OA6NCC3 632 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 WASH4PA8MWX3 477 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 GOLGA8NF8WBI6 632 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 B3GAT3O94766 335 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 DDHD2O94830 711 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 CTSHP09668 335 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 THRAP10827 490 aa10.58□□□□□ -0.72
CD44-210ENST00000434472 COX4I1P13073 169 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms