RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 CXorf51AA0A1B0GTR3 108 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 STK10O94804 968 aaKnown RBP23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 ASLP04424 464 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 MESP2Q0VG99 397 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 MLF2Q15773 248 aaPredicted RBP23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 SLC44A4Q53GD3 710 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 TMCO4Q5TGY1 634 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 TMEM215Q68D42 235 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 TXNDC11Q6PKC3 985 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 MAML1Q92585 1016 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 CIPCQ9C0C6 399 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 SEPT10Q9P0V9 454 aa23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 FEZ2Q9UHY8 353 aaPredicted RBP23.67■■□□□ 1.38
SMARCAL1-208ENST00000434435 TBC1D3BA6NDS4 549 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 KCNK1O00180 336 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 ATP5BP06576 529 aaKnown RBP23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 CCNB1P14635 433 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 STIP1P31948 543 aaKnown RBP23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 GALK1P51570 392 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 IFI35P80217 286 aaPredicted RBP23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 ECT2LQ008S8 904 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 RFTN1Q14699 578 aaPredicted RBP23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 LEKR1Q6ZMV7 388 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 TPRG1Q6ZUI0 275 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 GSTA5Q7RTV2 222 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 GJD3Q8N144 294 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 ALLCQ8N6M5 410 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 UCMAQ8WVF2 138 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 ELOVL2Q9NXB9 296 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 PCYOX1Q9UHG3 505 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 UNC80Q8N2C7 3258 aa23.66■■□□□ 1.38
SMARCAL1-208ENST00000434435 ATG2BQ96BY7 2078 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 PRRT4C9JH25 899 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 RNF103O00237 685 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 TIMM44O43615 452 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 NEBLO76041 1014 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 ECEL1O95672 775 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 PEX11BO96011 259 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 SERPINH1P50454 418 aaKnown RBP23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 RENBPP51606 427 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 SLC20A2Q08357 652 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 HNRNPDQ14103 355 aaKnown RBP23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 LBRQ14739 615 aaKnown RBP23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 PON2Q15165 354 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 IER5LQ5T953 404 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 MARC1Q5VT66 337 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 LINGO4Q6UY18 593 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 METTL3Q86U44 580 aaKnown RBP23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 UBALD2Q8IYN6 164 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 BBS5Q8N3I7 341 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 FAM71DQ8N9W8 422 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 CCDC26Q8TAB7 109 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 CASKIN2Q8WXE0 1202 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 USP29Q9HBJ7 922 aa23.65■■□□□ 1.38
SMARCAL1-208ENST00000434435 MAN2B1O00754 1011 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 GAS8O95995 478 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 SRPRAP08240 638 aaKnown RBP23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 PTPN3P26045 913 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 CTSOP43234 321 aaPredicted RBP23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 GDF10P55107 478 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 DHX34Q14147 1143 aaKnown RBP23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 ZNF235Q14590 738 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 INO80DQ53TQ3 878 aaPredicted RBP23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 TJAP1Q5JTD0 557 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 CCDC89Q8N998 374 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 USP33Q8TEY7 942 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 SLCO2A1Q92959 643 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 RTP4Q96DX8 246 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 VAT1Q99536 393 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 IL12RB2Q99665 862 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 ARHGEF3Q9NR81 526 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 HAUS2Q9NVX0 235 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 AMACRQ9UHK6 382 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 FBXL21Q9UKT6 434 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 CA14Q9ULX7 337 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 ERVW-1Q9UQF0 538 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 HS3ST2Q9Y278 367 aa23.64■■□□□ 1.37
SMARCAL1-208ENST00000434435 IFNB1P01574 187 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 DLDP09622 509 aaKnown RBP23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 DRD1P21728 446 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 ACTN2P35609 894 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 TNFRSF4P43489 277 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 MMP13P45452 471 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 STK19P49842 368 aaPredicted RBP23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 DR1Q01658 176 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 PRKCQQ04759 706 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 SLC10A7Q0GE19 358 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 WASHC5Q12768 1159 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 GRSF1Q12849 480 aaKnown RBP eCLIP23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 ZBTB17Q13105 803 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 E2F5Q15329 346 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 TMEM196Q5HYL7 178 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 MMGT1Q8N4V1 131 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 TEX26Q8N6G2 289 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 CYB5D2Q8WUJ1 264 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 SORCS1Q8WY21 1168 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 FAM3CQ92520 227 aa23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 RPL10LQ96L21 214 aaKnown RBP23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 CINPQ9BW66 212 aaPredicted RBP23.63■■□□□ 1.37
SMARCAL1-208ENST00000434435 CEP41Q9BYV8 373 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms