RNA–Protein interactions for RNA: ENST00000433807.5

MCF2L-215, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-215ENST00000433807 CTNNA2P26232 953 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 CTNNA1P35221 906 aaKnown RBP13.35□□□□□ -0.27
MCF2L-215ENST00000433807 SERPINH1P50454 418 aaKnown RBP13.35□□□□□ -0.27
MCF2L-215ENST00000433807 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
MCF2L-215ENST00000433807 DMWDQ09019 674 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 DLG2Q15700 870 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 C9orf64Q5T6V5 341 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 ANO7Q6IWH7 933 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 LINGO4Q6UY18 593 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 PEX26Q7Z412 305 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 METTL3Q86U44 580 aaKnown RBP13.35□□□□□ -0.27
MCF2L-215ENST00000433807 WDR5BQ86VZ2 330 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 LONP2Q86WA8 852 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 RCOR2Q8IZ40 523 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 PQLC3Q8N755 202 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 MDGA1Q8NFP4 955 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 EXD1Q8NHP7 514 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 FRS2Q8WU20 508 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 HMGB4Q8WW32 186 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 KRT35Q92764 455 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
MCF2L-215ENST00000433807 RBM41Q96IZ5 413 aaKnown RBP13.35□□□□□ -0.27
MCF2L-215ENST00000433807 RNF157Q96PX1 679 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 MAK16Q9BXY0 300 aaKnown RBP13.35□□□□□ -0.27
MCF2L-215ENST00000433807 CEP44Q9C0F1 390 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 LZTFL1Q9NQ48 299 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 PRSS16Q9NQE7 514 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
MCF2L-215ENST00000433807 MFHAS1Q9Y4C4 1052 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 PCDHGA2Q9Y5H1 932 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 PCDHA3Q9Y5H8 950 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 CAPN6Q9Y6Q1 641 aa13.35□□□□□ -0.27
MCF2L-215ENST00000433807 NUMA1Q14980 2115 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 THADAQ6YHU6 1953 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 DFFAO00273 331 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 AXIN1O15169 862 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 SIN3BO75182 1162 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 ZRANB2O95218 330 aaKnown RBP eCLIP13.34□□□□□ -0.27
MCF2L-215ENST00000433807 CD160O95971 181 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 C7P10643 843 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 ZFXP17010 805 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-215ENST00000433807 GABRG2P18507 467 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 MARCKSL1P49006 195 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 PXNP49023 591 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-215ENST00000433807 FNTBP49356 437 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
MCF2L-215ENST00000433807 TAZQ16635 292 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 ACCSLQ4AC99 568 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 NCBP2-AS2Q69YL0 99 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 HEATR6Q6AI08 1181 aaKnown RBP13.34□□□□□ -0.27
MCF2L-215ENST00000433807 C22orf39Q6P5X5 142 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 MFSD7Q6UXD7 560 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 PGBD3Q8N328 593 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-215ENST00000433807 CASKIN2Q8WXE0 1202 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 PTPRN2Q92932 1015 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 ERLEC1Q96DZ1 483 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 MTG2Q9H4K7 406 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 ANKRD36A6QL64 1941 aa13.34□□□□□ -0.27
MCF2L-215ENST00000433807 GON4LQ3T8J9 2241 aa13.33□□□□□ -0.27
MCF2L-215ENST00000433807 MIF4GDA9UHW6 222 aaKnown RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 K7ERQ8 282 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 APOL1O14791 398 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 SMAD6O43541 496 aaKnown RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 MFSD11O43934 449 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 PRAMEF11O60813 436 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 NDUFV2P19404 249 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 CDKN2BP42772 138 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 PEX5P50542 639 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 COPAP53621 1224 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 RWDD2BP57060 319 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 COPS2P61201 443 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 IL10RBQ08334 325 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 ELAVL3Q14576 367 aaKnown RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 PPP2R5EQ16537 467 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 INO80DQ53TQ3 878 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 SLC9A4Q6AI14 798 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 ZC3H14Q6PJT7 736 aaKnown RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 SPOCD1Q6ZMY3 1216 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 RFX6Q8HWS3 928 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 TMPRSS6Q8IU80 811 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 TP53INP2Q8IXH6 220 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 PCDH20Q8N6Y1 951 aaKnown RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 UBL4BQ8N7F7 174 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 NETO2Q8NC67 525 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 ZBTB44Q8NCP5 570 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 ISG20Q96AZ6 181 aaKnown RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 MRGPRX1Q96LB2 322 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 CCDC114Q96M63 670 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 ALS2CR12Q96Q35 445 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 MKRN2Q9H000 416 aaKnown RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 RSPH9Q9H1X1 276 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 SP110Q9HB58 689 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 PDFQ9HBH1 243 aa13.33□□□□□ -0.28
MCF2L-215ENST00000433807 UBA2Q9UBT2 640 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 IPO11Q9UI26 975 aaKnown RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 ARIH1Q9Y4X5 557 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-215ENST00000433807 ACTL7AQ9Y615 435 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms