RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 RILPL1Q5EBL4 403 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 CFAP58Q5T655 872 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 PRAMEF17Q5VTA0 474 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 ZNF474Q6S9Z5 364 aaPredicted RBP6.39□□□□□ -1.39
USP54-206ENST00000433394 NR1H4Q96RI1 486 aaPredicted RBP6.39□□□□□ -1.39
USP54-206ENST00000433394 ZNF347Q96SE7 839 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 LMAN2LQ9H0V9 348 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 TTYH1Q9H313 450 aaPredicted RBP6.39□□□□□ -1.39
USP54-206ENST00000433394 SLC32A1Q9H598 525 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 PRKRIP1Q9H875 184 aaPredicted RBP6.39□□□□□ -1.39
USP54-206ENST00000433394 INSL6Q9Y581 213 aa6.39□□□□□ -1.39
USP54-206ENST00000433394 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.38□□□□□ -1.39
USP54-206ENST00000433394 LRRC53A6NM62 1247 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 TNFSF14O43557 240 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 ST6GAL1P15907 406 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 IDUAP35475 653 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 HSF1Q00613 529 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 VWA5B1Q5TIE3 1220 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 TMEM154Q6P9G4 183 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 PXKQ7Z7A4 578 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 NEK8Q86SG6 692 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 CNTROBQ8N137 903 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 OSR1Q8TAX0 266 aaPredicted RBP6.38□□□□□ -1.39
USP54-206ENST00000433394 KCNG4Q8TDN1 519 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 FAM149B1Q96BN6 582 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 REPS1Q96D71 796 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 KLHL15Q96M94 604 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 FRG2BQ96QU4 278 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 TXNRD2Q9NNW7 524 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 SLC45A1Q9Y2W3 748 aa6.38□□□□□ -1.39
USP54-206ENST00000433394 TTBK1Q5TCY1 1321 aaPredicted RBP6.38□□□□□ -1.39
USP54-206ENST00000433394 FNDC1Q4ZHG4 1894 aaPredicted RBP6.37□□□□□ -1.39
USP54-206ENST00000433394 KDM3AQ9Y4C1 1321 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 A0A087X1B8 175 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 TCRBV7S3A2A0A539 114 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 B4DLN1 442 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 FOXN1O15353 648 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 PLAUP00749 431 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 SERPINC1P01008 464 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 LAMP2P13473 410 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 INSRRP14616 1297 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 CPOXP36551 454 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 PPARGP37231 505 aaPredicted RBP6.37□□□□□ -1.39
USP54-206ENST00000433394 MLH1P40692 756 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 CUL4AQ13619 759 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 VEPH1Q14D04 833 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 MEA1Q16626 185 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 PLK5Q496M5 336 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 SLC9B1Q4ZJI4 515 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 AWAT1Q58HT5 328 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 FAM205BPQ63HN1 556 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 CDC73Q6P1J9 531 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 PRSS45Q7RTY3 260 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 MRGPRGQ86SM5 289 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 ADGRF4Q8IZF3 695 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 SETD9Q8NE22 299 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 KLK15Q9H2R5 256 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 Q9N2J8 555 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 HCFC1R1Q9NWW0 138 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 POLG2Q9UHN1 485 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 FBXO4Q9UKT5 387 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 PCDHGB5Q9Y5G0 923 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 PSAT1Q9Y617 370 aa6.37□□□□□ -1.39
USP54-206ENST00000433394 ZNF335Q9H4Z2 1342 aaPredicted RBP6.36□□□□□ -1.39
USP54-206ENST00000433394 A6NCN8 305 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 GALTP07902 379 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 ZNF8P17098 575 aaPredicted RBP6.36□□□□□ -1.39
USP54-206ENST00000433394 TACR2P21452 398 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 YWHAQP27348 245 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 CIITAP33076 1130 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 TUBA4AP68366 448 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 PRAMEP78395 509 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 RHAGQ02094 409 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 ZNF268Q14587 947 aaPredicted RBP6.36□□□□□ -1.39
USP54-206ENST00000433394 CRYMQ14894 314 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 WTAPQ15007 396 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 TAF11Q15544 211 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 ALG10Q5BKT4 473 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 ALG10BQ5I7T1 473 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 MFSD4BQ5TF39 518 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 SNX30Q5VWJ9 437 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 ATG9BQ674R7 924 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 CRIP3Q6Q6R5 217 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 RTL10Q7L3V2 364 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 SLC46A3Q7Z3Q1 461 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 FAM160B2Q86V87 743 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 ARHGEF25Q86VW2 580 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 CHSY1Q86X52 802 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 FAM185AQ8N0U4 392 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 C1orf131Q8NDD1 294 aaKnown RBP6.36□□□□□ -1.39
USP54-206ENST00000433394 BCAS4Q8TDM0 211 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 SCFD2Q8WU76 684 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 FAR1Q8WVX9 515 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 RITA1Q96K30 269 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 H2AFJQ9BTM1 129 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 MUC13Q9H3R2 512 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 SMARCAD1Q9H4L7 1026 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 SH2D4AQ9H788 454 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 GRHL1Q9NZI5 618 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 ZNF70Q9UC06 446 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms