RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 NDUFA9Q16795 377 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SNX30Q5VWJ9 437 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 OR6B2Q6IFH4 312 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SULT1C3Q6IMI6 304 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 R3HCC1LQ7Z5L2 792 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PXYLP1Q8TE99 480 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CATSPER2Q96P56 530 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 HINFPQ9BQA5 517 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TBC1D23Q9NUY8 699 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 IFT80Q9P2H3 777 aaPredicted RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 AFG3L2Q9Y4W6 797 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 WNK2Q9Y3S1 2297 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 CHD5Q8TDI0 1954 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TCRBV9S1A1TA0A576 114 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 EPN2O95208 641 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 AOC1P19801 751 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 RAP1GDS1P52306 607 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 DNAJB13P59910 316 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PRAMEP78395 509 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 LRRC41Q15345 812 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 FAM189A2Q15884 450 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 AFTPHQ6ULP2 937 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SVOPLQ8N434 492 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 OIT3Q8WWZ8 545 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 KIF12Q96FN5 646 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 AGBL1Q96MI9 1066 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 FAM210AQ96ND0 272 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 BTBD10Q9BSF8 475 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ARNT2Q9HBZ2 717 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 KRT82Q9NSB4 513 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 WDR70Q9NW82 654 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SIRPGQ9P1W8 387 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 PCDHB12Q9Y5F1 795 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 MUC6Q6W4X9 2439 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 BLACEA4D250 179 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 BTBD19C9JJ37 291 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 WNT7AO00755 349 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TM7SF2O76062 418 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 APRTP07741 180 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 POU2F2P09086 479 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 NAT2P11245 290 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ADRA1DP25100 572 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 DNA2P51530 1060 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 OASLQ15646 514 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TMTC4Q5T4D3 741 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SEPT14Q6ZU15 432 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 DDX23Q9BUQ8 820 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TARS2Q9BW92 718 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ARHGAP39Q9C0H5 1083 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 POLR1EQ9GZS1 481 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TDRD3Q9H7E2 651 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 SP110Q9HB58 689 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 TLR8Q9NR97 1041 aaKnown RBP3.83□□□□□ -1.8
SHPRH-205ENST00000433355 RPS6KA6Q9UK32 745 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 NCOR2Q9Y618 2525 aa3.83□□□□□ -1.8
SHPRH-205ENST00000433355 ITGA4P13612 1032 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CLCN4P51793 760 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 DEFA1P59665 94 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 DEFA3P59666 94 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 FLOT2Q14254 428 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TMEM132BQ14DG7 1078 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 C6orf52Q5T4I8 152 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 BRAT1Q6PJG6 821 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 METTL25Q8N6Q8 603 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 LMO3Q8TAP4 145 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 FAM81AQ8TBF8 368 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HM13Q8TCT9 377 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HCAR2Q8TDS4 363 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 STAMQ92783 540 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 KLHL4Q9C0H6 718 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 EBF2Q9HAK2 575 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HAO1Q9UJM8 370 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TSPAN16Q9UKR8 245 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PPT2Q9UMR5 302 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CCDC162PA2VCL2 907 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ASMTLO95671 621 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CSH1P0DML2 217 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CSH2P0DML3 217 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PCNAP12004 261 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 GYS2P54840 703 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HNRNPH2P55795 449 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 MRPS5P82675 430 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 BNC1Q01954 994 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 RMND5BQ96G75 393 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PAIP2Q9BPZ3 127 aaKnown RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 UGT2B28Q9BY64 529 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 DPH5Q9H2P9 285 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 XPNPEP1Q9NQW7 623 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 NUDT4Q9NZJ9 180 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 FAM153AQ9UHL3 310 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 BAIAP2L1Q9UHR4 511 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 TCP11X1B4DZS4 312 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 KIAA0355O15063 1070 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 SNX2O60749 519 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 LYPLA1O75608 230 aaPredicted RBP3.82□□□□□ -1.8
SHPRH-205ENST00000433355 ENDOD1O94919 500 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CCNE2O96020 404 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 HPRP00739 348 aa3.82□□□□□ -1.8
SHPRH-205ENST00000433355 CYP2A6P11509 494 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms