RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 LTB4R2Q9NPC1 389 aa6.09□□□□□ -1.43
LINC00309-201ENST00000431020 EPS15L1Q9UBC2 864 aa6.09□□□□□ -1.43
LINC00309-201ENST00000431020 EVLQ9UI08 416 aaPredicted RBP6.09□□□□□ -1.43
LINC00309-201ENST00000431020 TTC7AQ9ULT0 858 aaPredicted RBP6.09□□□□□ -1.43
LINC00309-201ENST00000431020 MRPS17Q9Y2R5 130 aaKnown RBP6.09□□□□□ -1.43
LINC00309-201ENST00000431020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC00309-201ENST00000431020 HBS1LQ9Y450 684 aaKnown RBP6.09□□□□□ -1.43
LINC00309-201ENST00000431020 ZNF292O60281 2723 aa6.09□□□□□ -1.43
LINC00309-201ENST00000431020 SHROOM3Q8TF72 1996 aa6.09□□□□□ -1.43
LINC00309-201ENST00000431020 EPG5Q9HCE0 2579 aa6.09□□□□□ -1.43
LINC00309-201ENST00000431020 A0A1B0GVM2 712 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 TCAF2A6NFQ2 919 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 EIF3CLB5ME19 914 aaKnown RBP6.09□□□□□ -1.44
LINC00309-201ENST00000431020 PMPCBO75439 489 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 URI1O94763 535 aaPredicted RBP6.09□□□□□ -1.44
LINC00309-201ENST00000431020 PROSCO94903 275 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 JCHAINP01591 159 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 DDX6P26196 483 aaKnown RBP eCLIP6.09□□□□□ -1.44
LINC00309-201ENST00000431020 CXCL12P48061 93 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 DHPSP49366 369 aaPredicted RBP6.09□□□□□ -1.44
LINC00309-201ENST00000431020 CXCR3P49682 368 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 OXCT1P55809 520 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 CCDC173Q0VFZ6 552 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 ZNF234Q14588 700 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 MEA1Q16626 185 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 HP1BP3Q5SSJ5 553 aaPredicted RBP6.09□□□□□ -1.44
LINC00309-201ENST00000431020 RFX8Q6ZV50 586 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 RD3Q7Z3Z2 195 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 ZDHHC17Q8IUH5 632 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 MAP7D3Q8IWC1 876 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 KLHL7Q8IXQ5 586 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 CCDC170Q8IYT3 715 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 DCLK2Q8N568 766 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 NPWQ8N729 165 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 OR14C36Q8NHC7 312 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 UCMAQ8WVF2 138 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 IRGQQ8WZA9 623 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 ALG3Q92685 438 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 SYN2Q92777 582 aaPredicted RBP6.09□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D31Q96DN5 1066 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 ALS2CR12Q96Q35 445 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 EIF3CQ99613 913 aaKnown RBP6.09□□□□□ -1.44
LINC00309-201ENST00000431020 LRFN3Q9BTN0 628 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 HSFX1Q9UBD0 423 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 PRKAG3Q9UGI9 489 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 INTS6Q9UL03 887 aaKnown RBP6.09□□□□□ -1.44
LINC00309-201ENST00000431020 MYO6Q9UM54 1294 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 PCDHGC4Q9Y5F7 938 aa6.09□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3DA0A087WVF3 549 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3IA0A087WXS9 549 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3EA0A087X179 549 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3KA0A087X1G2 549 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 A0A1W2PP55 124 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TCRBV7S2A1N4TA0A589 114 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3FA6NER0 549 aaPredicted RBP6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3LB9A6J9 549 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 NCAM2O15394 837 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3HP0C7X1 549 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 PYGMP11217 842 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 AVPR2P30518 371 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 EPHB1P54762 984 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 RHOAP61586 193 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 CREB5Q02930 508 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 DMC1Q14565 340 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 ZNF235Q14590 738 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 RPS6KA1Q15418 735 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 PLEKHG6Q3KR16 790 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 FUT11Q495W5 492 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3GQ6DHY5 549 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3CQ6IPX1 549 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 FSTL4Q6MZW2 842 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TMEM92Q6UXU6 159 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.08□□□□□ -1.44
LINC00309-201ENST00000431020 HTR3DQ70Z44 454 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 ANKS1BQ7Z6G8 1248 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TTC7BQ86TV6 843 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TMEM139Q8IV31 216 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 RHOT2Q8IXI1 618 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TBC1D3Q8IZP1 549 aaPredicted RBP6.08□□□□□ -1.44
LINC00309-201ENST00000431020 STK40Q8N2I9 435 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TPCN2Q8NHX9 752 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 PLD4Q96BZ4 506 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 OMDQ99983 421 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 FEM1AQ9BSK4 669 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 TRIM62Q9BVG3 475 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 ARFGAP3Q9NP61 516 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 SHOC2Q9UQ13 582 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 ZNF148Q9UQR1 794 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 CACNA1BQ00975 2339 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 SEC16AO15027 2179 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 ATG2AQ2TAZ0 1938 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 UNC13CQ8NB66 2214 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 FAM92AA1XBS5 289 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 GRID2IPA4D2P6 1211 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 HMGB1P1B2RPK0 211 aaPredicted RBP6.08□□□□□ -1.44
LINC00309-201ENST00000431020 FSBPO95073 299 aa6.08□□□□□ -1.44
LINC00309-201ENST00000431020 HNRNPLP14866 589 aaKnown RBP eCLIP6.08□□□□□ -1.44
LINC00309-201ENST00000431020 PRLRP16471 622 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms